Domain Predictions — View

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IPR017703

Source: InterPro

Description

IPR017703 is a YgfZ/GcvT conserved site.

<p>This entry represents a conserved site, which includes includes the motif KGCYxGQE, that is found in glycine cleavage system T proteins (GcvT) and in the bacterial tRNA-modifying protein YgfZ.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v2002580.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycine cleavage T-protein family [Theobroma cacao] gi\|508777224\|gb\|EOY24480.1\|	Domains G3DSA:3.30.70.1400 IPR013977 IPR017703 PF08669 PTHR22602 PTHR22602:SF0 SSF103025 TIGR03317	8
Lj4g3v2371610.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycine cleavage T-protein family [Theobroma cacao] gi\|508777224\|gb\|EOY24480.1\|	Domains IPR013977 IPR017703 PF08669 PTHR22602 PTHR22602:SF0 SSF103025 TIGR03317	7
Lj4g3v2693590.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: aminomethyltransferase-like [Glycine max] gi\|356512604\|ref\|XP_003525008.1\|	Domains G3DSA:2.40.30.110 G3DSA:3.30.1360.120 G3DSA:3.30.70.1400 IPR006222 IPR013977 IPR017703 IPR027266 IPR028896 IPR029043 PF01571 PF08669 PIRSF006487 SSF101790 SSF103025 SignalP-TM_GRAM_POSITIVE TIGR03317	16
LotjaGi2g1v0426800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA-modifying protein YgfZ; TAIR: AT4G12130.1 Glycine cleavage T-protein family; Swiss-Prot: sp\|Q8L733\|Y4121_ARATH Putative transferase At4g12130, mitochondrial; TrEMBL-Plants: tr\|I1LGL4\|I1LGL4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426800	Domains G3DSA:3.30.1360.120 IPR017703 IPR027266 PTHR22602 PTHR22602:SF0 SSF103025 TIGR03317	7
LotjaGi4g1v0345600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA-modifying protein YgfZ; TAIR: AT4G12130.1 Glycine cleavage T-protein family; Swiss-Prot: sp\|Q8L733\|Y4121_ARATH Putative transferase At4g12130, mitochondrial; TrEMBL-Plants: tr\|I1LGL4\|I1LGL4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345600	Domains G3DSA:3.30.1360.120 IPR017703 IPR027266 PTHR22602 PTHR22602:SF0 SSF103025 TIGR03317	7
LotjaGi4g1v0388400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aminomethyltransferase; TAIR: AT1G60990.1 Glycine cleavage T-protein family; Swiss-Prot: sp\|Q681Y3\|Y1099_ARATH Putative transferase At1g60990, chloroplastic; TrEMBL-Plants: tr\|A0A151UBV7\|A0A151UBV7_CAJCA Aminomethyltransferase; Found in the gene: LotjaGi4g1v0388400	Domains G3DSA:3.30.1360.120 IPR006222 IPR017703 IPR027266 IPR028896 IPR029043 NON_CYTOPLASMIC_DOMAIN PF01571 PIRSF006487 PTHR13847 PTHR13847:SF262 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF101790 SSF103025 TIGR03317	18
LotjaGi4g1v0388400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aminomethyltransferase; TAIR: AT1G60990.1 Glycine cleavage T-protein family; Swiss-Prot: sp\|Q681Y3\|Y1099_ARATH Putative transferase At1g60990, chloroplastic; TrEMBL-Plants: tr\|A0A151UBV7\|A0A151UBV7_CAJCA Aminomethyltransferase; Found in the gene: LotjaGi4g1v0388400	Domains G3DSA:3.30.1360.120 IPR006222 IPR017703 IPR027266 IPR028896 IPR029043 PF01571 PIRSF006487 PTHR13847 PTHR13847:SF262 SSF101790 SSF103025 SignalP-TM TIGR03317	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TIGR03317	TIGRFAM	1	14.29