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IPR026904

Source: InterPro

Description

IPR026904 is a tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal.

<p>This entry represents the C-terminal domain of MnmG (also known as GidA). It consists of 4 helices, the last three being rather short and forming small bundle [[cite:PUB00051078], [cite:PUB00061994]]. MnmG is a tRNA modification enzyme found in bacteria and mitochondria that forms a complex with MnmE which is involved in the formation of methyluridine derivatives at the wobble uridine base in some tRNAs [[cite:PUB00043571], [cite:PUB00043572], [cite:PUB00090565]]. Based on mutational analysis this domain has been suggested to be implicated in binding of the D-stem of tRNA [[cite:PUB00061994]] and to be responsible for the interaction with protein MnmE [[cite:PUB00051078]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Lj4g3v2825560.1
– PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-like isoform X2 [Cicer arietinum] gi|502183352|ref|XP_004517119.1|
Domains
16
Lj4g3v2825560.2
– PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-like isoform X2 [Cicer arietinum] gi|502183352|ref|XP_004517119.1|
Domains
16
Lj4g3v2825560.4
– TRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Medicago truncatula] gi|357520027|ref|XP_003630302.1|
Domains
19
LotjaGi4g1v0410800.1
– TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp|Q55694|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr|I1K513|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800
Domains
18
LotjaGi4g1v0410800.2
– TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp|Q55694|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr|I1K513|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800
Domains
18
LotjaGi4g1v0410800.3
– TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp|Q55694|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr|I1K513|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800
Domains
18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TIGR00136 TIGRFAM 1 16.67