Domain Predictions — View

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SM01228

Source: SMART

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v2825560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-like isoform X2 [Cicer arietinum] gi\|502183352\|ref\|XP_004517119.1\|	Domains G3DSA:3.50.50.60 IPR002218 IPR004416 IPR020595 IPR023753 IPR026904 MF_00129 PF01134 PF13932 PR00411 PS01280 PTHR11806 PTHR11806:SF4 SM01228 SSF51905 TIGR00136	16
Lj4g3v2825560.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-like isoform X2 [Cicer arietinum] gi\|502183352\|ref\|XP_004517119.1\|	Domains G3DSA:3.50.50.60 IPR002218 IPR004416 IPR020595 IPR023753 IPR026904 MF_00129 PF01134 PF13932 PR00411 PS01280 PTHR11806 PTHR11806:SF4 SM01228 SSF51905 TIGR00136	16
Lj4g3v2825560.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG [Medicago truncatula] gi\|357520027\|ref\|XP_003630302.1\|	Domains G3DSA:3.50.50.60 IPR002218 IPR004416 IPR020595 IPR023753 IPR026904 NON_CYTOPLASMIC_DOMAIN PF01134 PF13932 PS01280 PTHR11806 PTHR11806:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01228 SignalP-noTM_EUK TIGR00136	19
LotjaGi4g1v0410800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp\|Q55694\|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr\|I1K513\|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800	Domains G3DSA:1.10.10.1800 G3DSA:1.10.150.570 G3DSA:3.50.50.60 IPR002218 IPR004416 IPR020595 IPR026904 IPR036188 MF_00129 PF01134 PF13932 PR00411 PS01280 PTHR11806 PTHR11806:SF10 SM01228 SSF51905 TIGR00136	18
LotjaGi4g1v0410800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp\|Q55694\|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr\|I1K513\|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800	Domains G3DSA:1.10.10.1800 G3DSA:1.10.150.570 G3DSA:3.50.50.60 IPR002218 IPR004416 IPR020595 IPR026904 IPR036188 MF_00129 PF01134 PF13932 PR00411 PS01280 PTHR11806 PTHR11806:SF10 SM01228 SSF51905 TIGR00136	18
LotjaGi4g1v0410800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TAIR: AT2G13440.1 glucose-inhibited division family A protein; Swiss-Prot: sp\|Q55694\|MNMG_SYNY3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr\|I1K513\|I1K513_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410800	Domains G3DSA:1.10.10.1800 G3DSA:1.10.150.570 G3DSA:3.50.50.60 IPR002218 IPR004416 IPR020595 IPR026904 IPR036188 MF_00129 PF01134 PF13932 PR00411 PS01280 PTHR11806 PTHR11806:SF10 SM01228 SSF51905 TIGR00136	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TIGR00136	TIGRFAM	1	16.67