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G3DSA:3.90.730.10

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0033897
Molecular function Ribonuclease T2 activity Catalysis of the two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.
Subterm of

Associated Lotus transcripts 21

Transcript Name Description Predicted domains Domain count
Lj0g3v0178959.1
– Ss-RNase [Pyrus communis] gi|116744185|dbj|BAF35964.1|
Domains
14
Lj0g3v0178969.1
– PREDICTED: ribonuclease MC-like [Cucumis sativus] gi|449459526|ref|XP_004147497.1|
Domains
4
Lj0g3v0217709.1
– ERECTA-like kinase [Glycine max] gi|351726455|ref|NP_001237639.1|
Domains
11
Lj0g3v0219759.1
– PREDICTED: ribonuclease MC-like [Cucumis sativus] gi|449459526|ref|XP_004147497.1|
Domains
4
Lj0g3v0261499.1
– PREDICTED: ribonuclease MC-like [Cucumis sativus] gi|449459526|ref|XP_004147497.1|
Domains
4
Lj1g3v4106910.1
– Zinc transporter protein [Ammopiptanthus nanus] gi|294845792|gb|ADF43066.1|
Domains
12
Lj2g3v1277800.1
– LCR-like protein [Medicago truncatula] gi|357487015|ref|XP_003613795.1|
Domains
18
Lj2g3v1277810.1
– PREDICTED: extracellular ribonuclease LE-like [Glycine max] gi|356499815|ref|XP_003518732.1|
Domains
18
Lj3g3v2921110.1
– PREDICTED: ribonuclease 2-like [Glycine max] gi|356520310|ref|XP_003528806.1|
Domains
11
LotjaGi1g1v0402400.1
– RNase; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|O80322|RNS1_PYRPY Ribonuclease S-1; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0402400
Domains
15
LotjaGi1g1v0403000.1
– RNase; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|O80322|RNS1_PYRPY Ribonuclease S-1; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0403000
Domains
15
LotjaGi1g1v0403200_LC.1
– RNase; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|O80322|RNS1_PYRPY Ribonuclease S-1; TrEMBL-Plants: tr|I3SK43|I3SK43_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0403200_LC
Domains
16
LotjaGi1g1v0403500.1
– RNase; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|O80322|RNS1_PYRPY Ribonuclease S-1; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0403500
Domains
15
LotjaGi1g1v0407100.1
– RNase; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|P04007|RNS2_NICAL Ribonuclease S-2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0407100
Domains
15
LotjaGi1g1v0407600_LC.1
– S-RNase; TAIR: AT1G26820.1 ribonuclease 3; Swiss-Prot: sp|Q40381|RNS7_NICAL Ribonuclease S-7; TrEMBL-Plants: tr|I3T6U4|I3T6U4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0407600_LC
Domains
6
LotjaGi1g1v0790000_LC.1
– RNase-like protein; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3T6U4|I3T6U4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0790000_LC
Domains
5
LotjaGi2g1v0076800_LC.1
– S-RNase; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0076800_LC
Domains
8
LotjaGi2g1v0302900.1
– Ribonuclease; TAIR: AT1G14220.1 Ribonuclease T2 family protein; Swiss-Prot: sp|P42815|RNS3_ARATH Ribonuclease 3; TrEMBL-Plants: tr|I3SNB3|I3SNB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0302900
Domains
19
LotjaGi2g1v0303000.1
– Ribonuclease; TAIR: AT2G02990.1 ribonuclease 1; Swiss-Prot: sp|P42813|RNS1_ARATH Ribonuclease 1; TrEMBL-Plants: tr|A0A1J7HE99|A0A1J7HE99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0303000
Domains
19
LotjaGi3g1v0469000.1
– Ribonuclease; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0469000
Domains
18
LotjaGi3g1v0469000.2
– Ribonuclease; TAIR: AT1G26820.1 ribonuclease 3; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0469000
Domains
19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd01061 CDD 1 4.76