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IPR033337 is a MT-associated protein TORTIFOLIA1/SPIRAL2-like.
<p>This entry includes a group of plant microtubule-associated proteins, including TORTIFOLIA1/SPIRAL2 and SPIRAL2-like (SP2L) from Arabidopsis. They regulate the orientation of cortical microtubules and the direction of organ growth [[cite:PUB00078491]].</p> <p>TORTIFOLIA1-like protein 1 (also known as SPIRAL2) is a microtubule-associated protein (MAP) that regulates the orientation of cortical microtubules and the direction of organ growth [[cite:PUB00078491]] and may regulate katanin-based microtubule (MT) severing [[cite:PUB00078492]]. During virus infection, it may stabilize MT crossovers to support the formation and intercellular spread of the viral RNA complexes [[cite:PUB00078498]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Microtubule | Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Glycine max] gi|356569846|ref|XP_003553106.1| | 4 | ||
| – | PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Glycine max] gi|356569846|ref|XP_003553106.1| | 5 | ||
| – | PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cicer arietinum] gi|502093420|ref|XP_004489938.1| | 10 | ||
| – | PREDICTED: microtubule-associated protein SPIRAL2-like [Glycine max] gi|356497528|ref|XP_003517612.1| | 3 | ||
| – | PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cicer arietinum] gi|502152205|ref|XP_004508815.1| | 13 | ||
| – | PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Glycine max] gi|356569846|ref|XP_003553106.1| | 3 | ||
| – | Microtubule-associated protein TORTIFOLIA1 [Medicago truncatula] gi|357459405|ref|XP_003599983.1| | 3 | ||
| – | Microtubule-associated protein TORTIFOLIA1; TAIR: AT2G07170.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4IK92|TORL2_ARATH TORTIFOLIA1-like protein 2; TrEMBL-Plants: tr|A0A0S3TD74|A0A0S3TD74_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0235300 | 10 | ||
| – | Microtubule-associated protein TORTIFOLIA1; TAIR: AT1G27210.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q93ZH1|TORL4_ARATH TORTIFOLIA1-like protein 4; TrEMBL-Plants: tr|G7K6Y7|G7K6Y7_MEDTR Microtubule-associated TORTIFOLIA-like protein; Found in the gene: LotjaGi2g1v0311800 | 16 | ||
| – | Microtubule-associated protein TORTIFOLIA1; TAIR: AT5G62580.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q6NPR6|TORL3_ARATH TORTIFOLIA1-like protein 3; TrEMBL-Plants: tr|A0A072URB3|A0A072URB3_MEDTR Microtubule-associated TORTIFOLIA-like protein; Found in the gene: LotjaGi4g1v0241600 | 12 | ||
| – | Microtubule-associated protein TORTIFOLIA1; TAIR: AT1G50890.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4I6M4|TORL1_ARATH TORTIFOLIA1-like protein 1; TrEMBL-Plants: tr|A0A0R0IYG9|A0A0R0IYG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0411200_LC | 4 | ||
| – | Microtubule-associated TORTIFOLIA1-like protein; TAIR: AT4G27060.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9T041|TOR1_ARATH Microtubule-associated protein TORTIFOLIA1; TrEMBL-Plants: tr|A0A0R0IYG9|A0A0R0IYG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0163800 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 8.33 |