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IPR036402

Source: InterPro

Description

IPR036402 is a Elongation factor Ts, dimerisation domain superfamily.

<p>This superfamily describes a β(2)-α(n)-β two layers (α-β) fold domain of EF-Tu (EF1A). In E. coli and mitochondrial Ts there are two subdomains of this fold [[cite:PUB00006344], [cite:PUB00032373]].</p> <p>Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) [[cite:PUB00033953]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
LotjaGi2g1v0220500.1
– Elongation factor Ts; TAIR: AT4G29060.1 elongation factor Ts family protein; Swiss-Prot: sp|B7K735|EFTS_CYAP7 Elongation factor Ts; TrEMBL-Plants: tr|A0A0B2SMD5|A0A0B2SMD5_GLYSO Elongation factor Ts, mitochondrial; Found in the gene: LotjaGi2g1v0220500
Domains
28
LotjaGi2g1v0237800.1
– Elongation factor Ts; TAIR: AT4G11120.1 translation elongation factor Ts (EF-Ts); Swiss-Prot: sp|B9SEZ6|EFTS_RICCO Elongation factor Ts, mitochondrial; TrEMBL-Plants: tr|A0A1J7GW85|A0A1J7GW85_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0237800
Domains
18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd14275 CDD 1 50.00