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Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: protein RRP5 homolog [Cicer arietinum] gi|502167476|ref|XP_004514152.1| | 22 | ||
– | PREDICTED: transcription elongation factor SPT6-like [Cicer arietinum] gi|502127604|ref|XP_004499769.1| | 37 | ||
– | PREDICTED: transcription elongation factor SPT6-like [Cicer arietinum] gi|502127604|ref|XP_004499769.1| | 37 | ||
– | PREDICTED: 30S ribosomal protein S1 homolog [Glycine max] gi|356538073|ref|XP_003537529.1| | 17 | ||
– | PREDICTED: 30S ribosomal protein S1-like [Cicer arietinum] gi|502135249|ref|XP_004502269.1| | 10 | ||
– | Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis thaliana] gi|42571149|ref|NP_973648.1| | 15 | ||
– | PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like [Fragaria vesca subsp]. vesca] gi|470142342|ref|XP_004306870.1| | 34 | ||
– | Translation initiation factor [Medicago truncatula] gi|357516503|ref|XP_003628540.1| | 14 | ||
– | PREDICTED: 30S ribosomal protein S1 homolog A-like [Cicer arietinum] gi|502093372|ref|XP_004489921.1| | 12 | ||
– | PREDICTED: 30S ribosomal protein S1 homolog A-like [Cicer arietinum] gi|502093372|ref|XP_004489921.1| | 12 | ||
– | PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Glycine max] gi|356539999|ref|XP_003538479.1| | 19 | ||
– | PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic-like [Cicer arietinum] gi|502107284|ref|XP_004493216.1| | 23 | ||
– | PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic-like [Cicer arietinum] gi|502107284|ref|XP_004493216.1| | 36 | ||
– | PREDICTED: transcription elongation factor SPT6-like isoform X2 [Cicer arietinum] gi|502107599|ref|XP_004493315.1| | 37 | ||
– | PREDICTED: enolase-phosphatase E1-like isoform X1 [Cicer arietinum] gi|502163996|ref|XP_004513014.1| | 27 | ||
– | PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial-like [Cicer arietinum] gi|502090489|ref|XP_004489245.1| | 33 | ||
– | PREDICTED: bromodomain testis-specific protein-like [Cicer arietinum] gi|502139419|ref|XP_004503759.1| | 10 | ||
– | PREDICTED: 30S ribosomal protein S1-like [Glycine max] gi|356576093|ref|XP_003556168.1| | 11 | ||
– | PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cicer arietinum] gi|502080298|ref|XP_004486520.1| | 18 | ||
– | Eukaryotic translation initiation factor 2 subunit alpha; TAIR: AT2G40290.1 Eukaryotic translation initiation factor 2 subunit 1; Swiss-Prot: sp|Q9SIZ2|IF2AH_ARATH Eukaryotic translation initiation factor 2 subunit alpha homolog; TrEMBL-Plants: tr|I3SIC1|I3SIC1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0415200 | 21 | ||
– | Polyribonucleotide nucleotidyltransferase; TAIR: AT3G03710.1 polyribonucleotide nucleotidyltransferase; Swiss-Prot: sp|Q69LE7|PNP1_ORYSJ Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; TrEMBL-Plants: tr|G7L1J6|G7L1J6_MEDTR Polyribonucleotide nucleotidyltransferase; Found in the gene: LotjaGi1g1v0648200 | 36 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|I1N8M6|I1N8M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0657000 | 45 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|I1N8M6|I1N8M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0657000 | 47 | ||
– | 30S ribosomal protein S1; TAIR: AT1G71720.1 Nucleic acid-binding proteins superfamily; Swiss-Prot: sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A; TrEMBL-Plants: tr|A0A0S3TAN2|A0A0S3TAN2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0115400 | 12 | ||
– | Elongation factor Ts; TAIR: AT4G29060.1 elongation factor Ts family protein; Swiss-Prot: sp|B7K735|EFTS_CYAP7 Elongation factor Ts; TrEMBL-Plants: tr|A0A0B2SMD5|A0A0B2SMD5_GLYSO Elongation factor Ts, mitochondrial; Found in the gene: LotjaGi2g1v0220500 | 28 | ||
– | Polyribonucleotide nucleotidyltransferase; TAIR: AT5G14580.1 polyribonucleotide nucleotidyltransferase; Swiss-Prot: sp|Q9S7G6|PNP2_ARATH Polyribonucleotide nucleotidyltransferase 2, mitochondrial; TrEMBL-Plants: tr|V7C0V9|V7C0V9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0243700 | 32 | ||
– | Polyribonucleotide nucleotidyltransferase; TAIR: AT5G14580.1 polyribonucleotide nucleotidyltransferase; Swiss-Prot: sp|Q9S7G6|PNP2_ARATH Polyribonucleotide nucleotidyltransferase 2, mitochondrial; TrEMBL-Plants: tr|V7C0V9|V7C0V9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0243700 | 35 | ||
– | Translation initiation factor IF-1; TAIR: AT4G11175.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q94KR7|IF1C_SOYBN Translation initiation factor IF-1, chloroplastic; TrEMBL-Plants: tr|G7LDQ8|G7LDQ8_MEDTR Translation initiation factor IF-1; Found in the gene: LotjaGi3g1v0047700 | 14 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.1 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 42 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.1 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|Q9CAM1|SPT62_ARATH Transcription elongation factor SPT6-like; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.1 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.2 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | Transcription elongation factor SPT6; TAIR: AT1G65440.1 global transcription factor group B1; Swiss-Prot: sp|A8MS85|SPT61_ARATH Transcription elongation factor SPT6 homolog; TrEMBL-Plants: tr|A0A1J7IEI3|A0A1J7IEI3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0103300 | 41 | ||
– | 30S ribosomal protein S1; TAIR: AT1G12800.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q4L6I1|RS1_STAHJ 30S ribosomal protein S1; TrEMBL-Plants: tr|A0A0B2QV70|A0A0B2QV70_GLYSO 30S ribosomal protein S1; Found in the gene: LotjaGi4g1v0424000 | 10 | ||
– | ATP-dependent RNA helicase family protein; TAIR: AT3G26560.1 ATP-dependent RNA helicase; Swiss-Prot: sp|Q38953|DEAH5_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5; TrEMBL-Plants: tr|A0A1J7GSK6|A0A1J7GSK6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0008200 | 34 | ||
– | ATP-dependent RNA helicase family protein; TAIR: AT3G26560.1 ATP-dependent RNA helicase; Swiss-Prot: sp|Q38953|DEAH5_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5; TrEMBL-Plants: tr|A0A1J7GSK6|A0A1J7GSK6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0008200 | 34 | ||
– | Polyribonucleotide nucleotidyltransferase; TAIR: AT3G11964.2 RIBOSOMAL RNA PROCESSING 5; Swiss-Prot: sp|F4J8K6|RRP5_ARATH rRNA biogenesis protein RRP5; TrEMBL-Plants: tr|I1JFV5|I1JFV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0113300 | 21 | ||
– | 30S ribosomal protein S1; TAIR: AT1G71720.1 Nucleic acid-binding proteins superfamily; Swiss-Prot: sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A; TrEMBL-Plants: tr|K7N3Z8|K7N3Z8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0286600 | 11 | ||
– | Polyribonucleotide nucleotidyltransferase; TAIR: AT3G23700.1 Nucleic acid-binding proteins superfamily; Swiss-Prot: sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic; TrEMBL-Plants: tr|A0A0L9T4A4|A0A0L9T4A4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0102800 | 16 | ||
– | 30S ribosomal protein S1; TAIR: AT5G30510.1 ribosomal protein S1; Swiss-Prot: sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic; TrEMBL-Plants: tr|A0A1J7I547|A0A1J7I547_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0262600 | 22 | ||
– | 30S ribosomal protein S1; TAIR: AT5G30510.1 ribosomal protein S1; Swiss-Prot: sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic; TrEMBL-Plants: tr|A0A1J7FV06|A0A1J7FV06_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0262600 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd05692 | CDD | 1 | 2.08 |