Domain Predictions — View

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TIGR00116

Source: TIGRFAM

Description

tsf: translation elongation factor Ts

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003746 View details of GO:0003746 AmiGO InterPro QuickGO	Molecular function	Translation elongation factor activity	Functions in chain elongation during polypeptide synthesis at the ribosome.	Subterm of GO:0008135
GO:0006414 View details of GO:0006414 AmiGO InterPro QuickGO	Biological process	Translational elongation	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.	Subterm of GO:0034645 Part of GO:0006412

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v0824620.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: enolase-phosphatase E1-like isoform X1 [Cicer arietinum] gi\|502163996\|ref\|XP_004513014.1\|	Domains Coil G3DSA:1.10.286.20 G3DSA:1.10.8.10 G3DSA:2.40.50.140 G3DSA:3.30.479.20 IPR001816 IPR003029 IPR009060 IPR012340 IPR014039 IPR018101 IPR022967 MF_00050 PF00575 PF00889 PS01126 PS01127 PS50126 PTHR11741 PTHR11741:SF3 SM00316 SSF46934 SSF50249 SSF54713 TIGR00116 cd14275 mobidb-lite	27
Lj2g3v0918390.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor Ts, mitochondrial-like [Cicer arietinum] gi\|502090285\|ref\|XP_004489179.1\|	Domains Coil G3DSA:1.10.286.20 G3DSA:1.10.8.10 G3DSA:3.30.479.20 IPR001816 IPR009060 IPR014039 IPR018101 MF_00050 PF00889 PS01127 PTHR11741 SSF46934 SSF54713 TIGR00116 cd14275	16
LotjaGi2g1v0220500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor Ts; TAIR: AT4G29060.1 elongation factor Ts family protein; Swiss-Prot: sp\|B7K735\|EFTS_CYAP7 Elongation factor Ts; TrEMBL-Plants: tr\|A0A0B2SMD5\|A0A0B2SMD5_GLYSO Elongation factor Ts, mitochondrial; Found in the gene: LotjaGi2g1v0220500	Domains Coil G3DSA:1.10.286.20 G3DSA:1.10.8.10 G3DSA:2.40.50.140 G3DSA:3.30.479.20 IPR001816 IPR003029 IPR009060 IPR012340 IPR014039 IPR018101 IPR022967 IPR036402 MF_00050 PF00575 PF00889 PS01126 PS01127 PS50126 PTHR11741 PTHR11741:SF3 SM00316 SSF46934 SSF50249 SSF54713 TIGR00116 cd14275 mobidb-lite	28
LotjaGi2g1v0237800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor Ts; TAIR: AT4G11120.1 translation elongation factor Ts (EF-Ts); Swiss-Prot: sp\|B9SEZ6\|EFTS_RICCO Elongation factor Ts, mitochondrial; TrEMBL-Plants: tr\|A0A1J7GW85\|A0A1J7GW85_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0237800	Domains Coil G3DSA:1.10.286.20 G3DSA:1.10.8.10 G3DSA:3.30.479.20 IPR001816 IPR009060 IPR014039 IPR018101 IPR036402 MF_00050 PF00889 PS01127 PTHR11741 PTHR11741:SF0 SSF46934 SSF54713 TIGR00116 cd14275	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd14275	CDD	1	25.00