Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR038729 is a Rad50/SbcC-type AAA domain.
<p>This entry represents the AAA domain found in some DNA repair proteins, such as Rad50, SbcC, RecF, RecN and structural maintenance of chromosomes proteins 5 and 6 (Smc5-Smc6) [[cite:PUB00101805], [cite:PUB00101806], [cite:PUB00062777]].</p> <p>AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which exert their activity through the energy-dependent unfolding of macromolecules [[cite:PUB00014779]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Structural maintenance of chromosomes family protein; TAIR: AT5G15920.1 structural maintenance of chromosomes 5; Swiss-Prot: sp|Q9LFS8|SMC5_ARATH Structural maintenance of chromosomes protein 5; TrEMBL-Plants: tr|G7J0X6|G7J0X6_MEDTR Structural maintenance-like chromosomes-protein; Found in the gene: LotjaGi3g1v0119500_LC | 9 | ||
| – | DNA repair protein RAD50; TAIR: AT2G31970.1 DNA repair-recombination protein (RAD50); Swiss-Prot: sp|Q9SL02|RAD50_ARATH DNA repair protein RAD50; TrEMBL-Plants: tr|A0A151SQF0|A0A151SQF0_CAJCA DNA repair protein RAD50; Found in the gene: LotjaGi6g1v0040800 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd03240 | CDD | 1 | 50.00 |