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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Thiol-dependent ubiquitin-specific protease activity | Catalysis of the thiol-dependent hydrolysis of a peptide bond formed by the C-terminal glycine of ubiquitin and another protein. | ||
| Biological process | Protein deubiquitination | The removal of one or more ubiquitin groups from a protein. | ||
| Biological process | Ubiquitin-dependent ERAD pathway | The series of steps necessary to target endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. Begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein ubiquitination necessary for correct substrate transfer, transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome. | ||
| Molecular function | Ubiquitinyl hydrolase activity | Catalysis of the hydrolysis of ubiquitin from proteins and other molecules. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q567B1|OTU1_DANRE Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 | 9 | ||
| – | Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q567B1|OTU1_DANRE Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 | 9 | ||
| – | Ubiquitin thioesterase OTU1; TAIR: AT1G50670.1 OTU-like cysteine protease family protein; Swiss-Prot: sp|Q55BI3|OTU1_DICDI Ubiquitin thioesterase OTU1; TrEMBL-Plants: tr|I3T4E6|I3T4E6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0029400 | 9 | ||
| – | OTU domain-containing protein; TAIR: AT2G38025.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8LBZ4|OTU_ARATH OTU domain-containing protein At3g57810; TrEMBL-Plants: tr|I3TAS0|I3TAS0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0215900 | 9 | ||
| – | Otu domain-containing protein; TAIR: AT2G38025.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8LBZ4|OTU_ARATH OTU domain-containing protein At3g57810; TrEMBL-Plants: tr|I3TAS0|I3TAS0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0215900 | 3 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| PTHR13312:SF3 | PANTHER | 1 | 20.00 |