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PF16719

Description

SAWADEE domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Chromatin binding Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.

Associated Lotus transcripts 24

Transcript Name Description Predicted domains Domain count
Os09g0346900 [Oryza sativa Japonica Group] gi|115478697|ref|NP_001062942.1| 7
Chain B, Crystal Structure Of Shh1 Sawadee Domaingi|485601914|pdb|4IUQ|A Chain A, Crystal Structure Of Shh1 Sawadee Domaingi|485601915|pdb|4IUR|B Chain B, Crystal Structure Of Shh1 Sawadee Domain In Complex With H3k9me3 Peptidegi|485601917|pdb|4IUR|A Chain A, Crystal Structure Of Shh1 Sawadee Domain In Complex With H3k9me3 Peptidegi|485601918|pdb|4IUT|A Chain A, Crystal Structure Of Shh1 Sawadee Domain In Complex With H3k9me2 Peptidegi|485601919|pdb|4IUT|B Chain B, Crystal Structure Of Shh1 9
Sequence-specific DNA binding protein [Arabidopsis lyrata subsp]. lyrata] gi|297834744|ref|XP_002885254.1| 15
Sequence-specific DNA binding protein [Arabidopsis lyrata subsp]. lyrata] gi|297834744|ref|XP_002885254.1| 5
Sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gi|22331151|ref|NP_188467.2| 6
Sequence-specific DNA binding protein [Arabidopsis lyrata subsp]. lyrata] gi|297834744|ref|XP_002885254.1| 5
Rubisco methyltransferase family protein [Theobroma cacao] gi|508701647|gb|EOX93543.1| 3
Rubisco methyltransferase family protein [Theobroma cacao] gi|508701647|gb|EOX93543.1| 3
Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126100_LC 10
Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126200_LC 7
Protein SAWADEE HOMEODOMAIN-like protein 1; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126400_LC 7
Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC 10
Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC 10
Protein sawadee homeodomain-like 1; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I1KGJ4|I1KGJ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0126600_LC 8
Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3T1R4|I3T1R4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0408600 10
DNA-BINDING TRANSCRIPTION FACTOR 2; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|G7LDQ2|G7LDQ2_MEDTR Sequence-specific DNA-binding transcription factor; Found in the gene: LotjaGi3g1v0044200 17
Protein sawadee homeodomain-like 2; TAIR: AT3G18380.1 DNA-BINDING TRANSCRIPTION FACTOR 2; Swiss-Prot: sp|Q8RWJ7|SHH2_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 2; TrEMBL-Plants: tr|A0A0B2PMB5|A0A0B2PMB5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0044300 12
Protein sawadee homeodomain-like 2; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0183600_LC 7
Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0183600_LC 8
Protein sawadee homeodomain-like 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370500_LC 8
Protein sawadee homeodomain-like 1; TAIR: AT1G15215.3 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370500_LC 11
Protein sawadee homeodomain-like 2; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|I3SAF7|I3SAF7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0370700_LC 8
N utilization substance protein B homolog; TAIR: AT4G25330.1 SAWADEE protein; Swiss-Prot: sp|A1S6X3|FADR_SHEAM Fatty acid metabolism regulator protein; TrEMBL-Plants: tr|K7LYC7|K7LYC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0024700 3
Protein SAWADEE HOMEODOMAIN-like protein 1; TAIR: AT1G15215.2 SAWADEE HOMEODOMAIN protein; Swiss-Prot: sp|Q9XI47|SHH1_ARATH Protein SAWADEE HOMEODOMAIN HOMOLOG 1; TrEMBL-Plants: tr|A0A151SH36|A0A151SH36_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0038600 10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00086 CDD 1 4.17