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Tryptophan synthase alpha chain [trpA].
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Tryptophan synthase activity | Catalysis of the reaction: L-serine + (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O. | ||
| Biological process | Tryptophan metabolic process | The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic [Glycine max] gi|356572236|ref|XP_003554276.1| | 14 | ||
| – | TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein; TAIR: AT4G02610.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|O22765|TRPA1_ARATH Tryptophan synthase alpha chain; TrEMBL-Plants: tr|I3S0A7|I3S0A7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0714100 | 14 | ||
| – | TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein; TAIR: AT4G02610.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|O22765|TRPA1_ARATH Tryptophan synthase alpha chain; TrEMBL-Plants: tr|I3S0A7|I3S0A7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0714100 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd04724 | CDD | 1 | 33.33 |