Domain Predictions — View

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PF00456

Source: Pfam

Description

Transketolase, thiamine diphosphate binding domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v2737470.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transketolase, chloroplastic-like [Glycine max] gi\|356506190\|ref\|XP_003521870.1\|	Domains Coil G3DSA:3.40.50.920 G3DSA:3.40.50.970 IPR005474 IPR005475 IPR009014 IPR020826 IPR029061 IPR033247 IPR033248 PF00456 PF02779 PF02780 PS00802 PTHR11624 PTHR11624:SF81 SM00861 SSF52518 SSF52922 cd07033	20
Lj3g3v2737470.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transketolase, chloroplastic-like [Glycine max] gi\|356506190\|ref\|XP_003521870.1\|	Domains Coil G3DSA:3.40.50.970 IPR005474 IPR029061 IPR033247 PF00456 PTHR11624 PTHR11624:SF81 SSF52518	9
Lj3g3v2737470.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transketolase, chloroplastic-like [Glycine max] gi\|356506190\|ref\|XP_003521870.1\|	Domains Coil G3DSA:3.40.50.970 IPR005474 IPR029061 IPR033247 PF00456 PS00801 PTHR11624 PTHR11624:SF81 SSF52518 cd02012 mobidb-lite	12
Lj5g3v2291280.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transketolase, chloroplastic-like [Cicer arietinum] gi\|502121526\|ref\|XP_004497357.1\|	Domains G3DSA:3.40.50.970 IPR005474 IPR029061 IPR033247 PF00456 PTHR11624 PTHR11624:SF81 SSF52518	8
Lj5g3v2292500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transketolase, chloroplastic-like [Glycine max] gi\|356576867\|ref\|XP_003556551.1\|	Domains G3DSA:3.40.50.920 G3DSA:3.40.50.970 IPR005474 IPR005475 IPR005478 IPR009014 IPR020826 IPR029061 IPR033247 IPR033248 NON_CYTOPLASMIC_DOMAIN PF00456 PF02779 PF02780 PS00801 PS00802 PTHR11624 PTHR11624:SF81 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00861 SSF52518 SSF52922 TIGR00232 cd02012 cd07033 mobidb-lite	29
LotjaGi3g1v0434600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1-deoxy-D-xylulose-5-phosphate synthase, Transketolase; TAIR: AT2G45290.1 Transketolase; Swiss-Prot: sp\|F4IW47\|TKTC2_ARATH Transketolase-2, chloroplastic; TrEMBL-Plants: tr\|A0A0L9UT98\|A0A0L9UT98_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0434600	Domains Coil G3DSA:3.40.50.920 G3DSA:3.40.50.970 IPR005474 IPR005475 IPR005478 IPR009014 IPR020826 IPR029061 IPR033247 IPR033248 PF00456 PF02779 PF02780 PS00801 PS00802 PTHR43522 PTHR43522:SF12 SM00861 SSF52518 SSF52922 TIGR00232 cd02012 cd07033 mobidb-lite	25
LotjaGi5g1v0360800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1-deoxy-D-xylulose-5-phosphate synthase, Transketolase; TAIR: AT2G45290.1 Transketolase; Swiss-Prot: sp\|Q43848\|TKTC_SOLTU Transketolase, chloroplastic; TrEMBL-Plants: tr\|A0A151RWZ7\|A0A151RWZ7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0360800	Domains G3DSA:3.40.50.920 G3DSA:3.40.50.970 IPR005474 IPR005475 IPR005478 IPR009014 IPR020826 IPR029061 IPR033247 IPR033248 NON_CYTOPLASMIC_DOMAIN PF00456 PF02779 PF02780 PS00801 PS00802 PTHR43522 PTHR43522:SF11 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00861 SSF52518 SSF52922 TIGR00232 cd02012 cd07033 mobidb-lite	29
LotjaGi5g1v0360800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	1-deoxy-D-xylulose-5-phosphate synthase, Transketolase; TAIR: AT3G60750.1 Transketolase; Swiss-Prot: sp\|Q43848\|TKTC_SOLTU Transketolase, chloroplastic; TrEMBL-Plants: tr\|A0A151RWZ7\|A0A151RWZ7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0360800	Domains G3DSA:3.40.50.920 G3DSA:3.40.50.970 IPR005474 IPR005475 IPR005478 IPR009014 IPR020826 IPR029061 IPR033247 IPR033248 NON_CYTOPLASMIC_DOMAIN PF00456 PF02779 PF02780 PS00801 PS00802 PTHR43522 PTHR43522:SF11 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00861 SSF52518 SSF52922 TIGR00232 cd02012 cd07033	28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd07033	CDD	1	12.50