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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0360800 |
| Transcript ID | LotjaGi5g1v0360800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1-deoxy-D-xylulose-5-phosphate synthase, Transketolase; TAIR: AT2G45290.1 Transketolase; Swiss-Prot: sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic; TrEMBL-Plants: tr|A0A151RWZ7|A0A151RWZ7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0360800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67506804..67511237) extracted from Lotus japonicus Gifu genome v1.2.
ATTGATTGATCTTTAGGTACATTGGCAAAAAAATTGAGAGGTAGATAAAGAAAGTGTGTAGGAAAGAAAGATAGATAGCA AGAAGCATAGGCTGAGATTTTCCACTTCATGTGGACCGCAGCTACAAATCATTCTTTGGATCAGATACAGATAATATCAA TAGCTACCAACTAACTACCACTATACCACTATCACTGTGGTGTGTCTTCTTCTTCATCTTCATCTTCTGAATCCACTTCT TCACTAACAAACTATGGCTTCTTCTTCTTCCCTTCACTTATCACAAGCACTTGCTGTGAATCTTCACGGTGGCTTCAACT CTTCTTCTTCTTCCTCTGATCGTGTTGCACTCTCCAATTCTTTCCCTGCATTCTCTGGTTTGAAATCGCATTCTTCATGC AAACATGCTGCTACCCCTTCACGCAGAAGGGTTGGTGGAACTACCACCTCCACCATGGTTCGTGCCACTGCTGTTGAGAC ACTTGACAAGACCGCTGAGGTTTCTCTGGTGGAGAAATCTGTTAACACCATTCGGTTTCTCTCCATTGATGCTGTTGAGA AGGCCAATTCCGGTCACCCGGGTTTACCTATGGGTTGTGCTCCGATGGGTCATATTCTCTATGATGAGATCATGAGGTAC AATCCTAAGAACCCTTCTTGGTTCAACCGTGACAGGTTTGTTCTCTCTGCTGGCCATGGATGCATGCTCCAGTATGCTCT GCTTCACCTTGCTGGATATGACAGTGTCAAGGTGAATTGTCCTTTTCCTTGTCTTTATCTATTTACTGCTGGTTTGGTTG GGATTAATGCATAGAATCAATTTTGGGGAGAAGTTTTTATGAGTAATATATGGGTTTTATAATTGATTATAAAGAGAGAG AAGCTGGATCTGTGAGAATCTAAATCCGGGCTTTACTTTTTTAATGAAAAGCTGTCATGGGAATGAAACATGCAAAGAAT TGTAAGGATGTCAGTTTTCAATTAGTTGTGATATTCATGCCATCTGCATTATTAATGATGTAACATTGTTGTTTTGTTTT AGATGCAAATAATTTCATTTACTTTGATTGGTGAAACTGTTTTGAATGAATCCTTTTAAATGTGTGACATTGTTTTATAT CTGTTTTGGTGAGATGTGTTGTGATATATACCTATCAAAATGTTTATTATGACTTTTTATGAAAATATAGCTGTGGGATC TTCATTAAGCTGAATTTATTGTGCTGTGGTGAAATAATAGGAAGAGGACTTGAAGGAATTCCGTCAGTGGGGAAGCAAAA CTCCTGGGCATCCTGAGAATTTTGAGACATATGGAATTGAAGTGACCACAGGTCTGATATCTCTTTAGTTTATGTTACCA CGAGTATGACCCCTTTTTGGCTATGTTTTGTTATCCCAATTATCCTCTTGTTTTGTTTAGGTCCTCTGGGTCAGGGCATT GCCAACGGCGTTGGATTGGCACTTGCTGAGAAGCACTTGGCTGCACGATTTAACAAGCCTGACAGTGAGATTGTTGACCA TTACACGTAAGCTAACTGCATCTTGTTCCCGGCCCTCTATCTACATTGTGATCTGTGCACTTGTAATGCCTTGCTTTCTT GGTGTTTACTAATGAGATTTTTCTTATCTTTTGCCTCCAGGTATGTTATATTGGGTGATGGTTGTCAAATGGAGGGAATA TCGAATGAAGCATGCTCACTTGCTGGCCACTGGGGTCTAGGGAAGCTTATTGCTTTATATGATGACAACCACATTTCCAT TGATGGTGACACTGAAATTGCATTCACTGAGAATGTTGATAAACGTTTTGAGGCACTTGGGTGGCATGTAATTTGGGTAA AGAATGGAAATACTGGGTACGATGAGATTCGTGCAGCCATTAAGGAAGCAAAGGCTGTCAAAGACAAACCTACCCTGATC AAGGTTAGTGACATGAAATGGAGCTTCCAGTAAATGGATTTATCCAATCCATCTGATGTTTGACTTTATCATACTAGTCG AAGTAGCTTAACAAACAATAACATGAGTACTGCAAGAATGAAACTAAACCATTTTTATGTGTTTTTTTTATTGTTTATAT CTGTTTTATTCAGCTTATTTGTTGGTCATATCATATTTCATTGTGATTATTTTTTCACAGGTAACCACTACCATTGGATT TGGTTCTCCAAACAAGGCTAATTCATACAGTGTTCATGGAAGTGCATTGGGTGCTAAAGAAGTGGATGCTACTAGGAAGA ATCTTGGATGGCCACATGAACCTTTCCATGTGCCAGAAGAAGTTAAAAAGTATGCATTTTGGGTGGTTAAATGTTCTGTT TCCTGTTAGTCAACTGAAATTTTCATGATCTTGAATGAAACTCATTTAACATTCTACAGGCATTGGAGTCGCCATGTCCC TGAGGGTGCTGCACTTGAAGCTGAGTGGAATGCTAAGTTTGCTGAATATGAGAAGAAATACAAGGAGGATGCTGAAGAGC TAAAATCTATTATTACTGGTGTATTACCTGCTGGTTGGGAGAAAGCACTCCCGGTGAGTAAAGTGCCAAACTTTTAGGCT TCTTCTTATCTTTGTCTTGAGGTATCTCCCCAGTAGTTTACATTATGTCCGATCCAAATTTATCATGAATTTTACGCAAA AGGGTGTTAAAATTCATGTTAATTGGCATGTTAATTGCATCTTCTTCATCACACTTCTGCTTCAAAGTTTTAAGATAAGT AAACCCGTCCTCCACTAATAGTTTCTGGAATATTGATCACATTTCCAATTTGATTTCATCTTTCAGACATACACTCCAGA AAACCCTGGTGATGCTACAAGAAATCTGTCTCAGCAAAATCTAAATGCCCTTGCTAAGGTTCTCCCTGGTCTGATTGGTG GCAGTGCAGATCTTGCTTCTTCCAACATGACCTTGTTGAAAAGTTATGGAGATTTCCAAAAGGATACCCCAGAAGAGCGC AATGTTCGATTTGGTGTTAGAGAGCACGGAATGGGAGCAATCTGCAATGGTATTGCTCTTCACAGCCCTGGATTCATTCC ATATTGTGCAACTTTCTTTGTCTTCACTGACTACATGAGAGCCGCCATAAGGATTTCGGCGCTGTCCGAAGCTGGAGTTA TCTATGTTATGACTCATGATTCAATTGGACTTGGAGAGGATGGACCAACTCATCAGCCAATAGAGCACTTGGCAAGCTTC CGGGCAATGCCGAATGTTTTGATGCTTCGTCCGGCTGATGGTAATGAAACTGCCGGATCATACAAAGTTGCCGTGCTTAA CAAGAAGAGACCCTCAATCCTTGCCCTTTCTCGGCAAAAGTTACCCCAGCTTCCGGGAACTTCTATTGAAGGAGTTGAAA AGGGTGGCTACATCATTTCAGACAACTCATCAGGTAACAAGCCTGATGTGATCTTGCTGAGCACTGGTTCTGAGTTGGAA ATTGCCGCCGCTGCTGGTGAGGATCTAAGGAAGGAAGGAAAAACTGTTAGAGTTGTTTCTTTTGTTAGCTGGGAACTTTT TGATGACCAGTCAGATGAATACAAGGAGAGTGTTCTCCCTGCTGCTGTGACAGCTAGAGTTAGCATTGAGGCAGCATCAA CCTTTGGTTGGCATAAGCTTGTTGGAAGCAAAGGAAAAGCCATAGGCATTGATCGATTCGGAGCAAGTGCTCCAGCAGGA AAAATATATAAGGAGTTCGGTATCACCAAGGAAGCTGTTATTGCTGCTGCCAAAGAAGTTTCTTAGATCTATTGAGGTTC TATTTTTTTTTTCTTTCTTTCTTTTTCATGCAAAACTTGTGGGTTTCAAAGGTGGCTTTGCGTTACTATTACAAGAATGG TTTCTTGAGATGCCATTGTAGCCACAATAAGGACGGTTAGATTGCTCTTGCATGTGATTCTCAGAGTAGCAACATCGTGT AAAGGATGAGATGAACTAATGAAGTTGAATGAATTTGTAACAACTACTTTGGCATGTGAGTTTGCACCTTGATGTAGTTG AATTCAATGATCCTCACTCCAGCACTGATTTTAAGTCCAATCAATTATGGCTTCTTTGAAGAATTATATCCTTCTCCAAT TCTTTTTTCTTTCTTTTTCTTTCCAAAGGATCTGGTGTAATTAAAATCATTGCTATATTGTTTCTCTGAAAAGCTAGGGC TAGTAACTGCCTTAATATAAAAAAACTTCCTTGAATTCATTGATCCTCATCTAGATTTTAGAGAATGAATTCGAATAGAA GAATAAGTGTGTGGGTAAACACTCAATTAAGCAATTATGGCATTAAGAGTTTATCTCAAATGTGCTTATTCGTAAGATTG AAATAAGCTGAAATATGTTAAAGGTGGGCATAAACACTTATCTTATGAAAATAAACTTAAAACTGCTTTTAGGTATATCA TTAACTAGTTACACATGATTTTCCAAAGACTTGC
CDS sequence (LotjaGi5g1v0360800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTCTTCTTCCCTTCACTTATCACAAGCACTTGCTGTGAATCTTCACGGTGGCTTCAACTCTTCTTCTTCTTC CTCTGATCGTGTTGCACTCTCCAATTCTTTCCCTGCATTCTCTGGTTTGAAATCGCATTCTTCATGCAAACATGCTGCTA CCCCTTCACGCAGAAGGGTTGGTGGAACTACCACCTCCACCATGGTTCGTGCCACTGCTGTTGAGACACTTGACAAGACC GCTGAGGTTTCTCTGGTGGAGAAATCTGTTAACACCATTCGGTTTCTCTCCATTGATGCTGTTGAGAAGGCCAATTCCGG TCACCCGGGTTTACCTATGGGTTGTGCTCCGATGGGTCATATTCTCTATGATGAGATCATGAGGTACAATCCTAAGAACC CTTCTTGGTTCAACCGTGACAGGTTTGTTCTCTCTGCTGGCCATGGATGCATGCTCCAGTATGCTCTGCTTCACCTTGCT GGATATGACAGTGTCAAGGAAGAGGACTTGAAGGAATTCCGTCAGTGGGGAAGCAAAACTCCTGGGCATCCTGAGAATTT TGAGACATATGGAATTGAAGTGACCACAGGTCCTCTGGGTCAGGGCATTGCCAACGGCGTTGGATTGGCACTTGCTGAGA AGCACTTGGCTGCACGATTTAACAAGCCTGACAGTGAGATTGTTGACCATTACACGTATGTTATATTGGGTGATGGTTGT CAAATGGAGGGAATATCGAATGAAGCATGCTCACTTGCTGGCCACTGGGGTCTAGGGAAGCTTATTGCTTTATATGATGA CAACCACATTTCCATTGATGGTGACACTGAAATTGCATTCACTGAGAATGTTGATAAACGTTTTGAGGCACTTGGGTGGC ATGTAATTTGGGTAAAGAATGGAAATACTGGGTACGATGAGATTCGTGCAGCCATTAAGGAAGCAAAGGCTGTCAAAGAC AAACCTACCCTGATCAAGGTAACCACTACCATTGGATTTGGTTCTCCAAACAAGGCTAATTCATACAGTGTTCATGGAAG TGCATTGGGTGCTAAAGAAGTGGATGCTACTAGGAAGAATCTTGGATGGCCACATGAACCTTTCCATGTGCCAGAAGAAG TTAAAAAGCATTGGAGTCGCCATGTCCCTGAGGGTGCTGCACTTGAAGCTGAGTGGAATGCTAAGTTTGCTGAATATGAG AAGAAATACAAGGAGGATGCTGAAGAGCTAAAATCTATTATTACTGGTGTATTACCTGCTGGTTGGGAGAAAGCACTCCC GACATACACTCCAGAAAACCCTGGTGATGCTACAAGAAATCTGTCTCAGCAAAATCTAAATGCCCTTGCTAAGGTTCTCC CTGGTCTGATTGGTGGCAGTGCAGATCTTGCTTCTTCCAACATGACCTTGTTGAAAAGTTATGGAGATTTCCAAAAGGAT ACCCCAGAAGAGCGCAATGTTCGATTTGGTGTTAGAGAGCACGGAATGGGAGCAATCTGCAATGGTATTGCTCTTCACAG CCCTGGATTCATTCCATATTGTGCAACTTTCTTTGTCTTCACTGACTACATGAGAGCCGCCATAAGGATTTCGGCGCTGT CCGAAGCTGGAGTTATCTATGTTATGACTCATGATTCAATTGGACTTGGAGAGGATGGACCAACTCATCAGCCAATAGAG CACTTGGCAAGCTTCCGGGCAATGCCGAATGTTTTGATGCTTCGTCCGGCTGATGGTAATGAAACTGCCGGATCATACAA AGTTGCCGTGCTTAACAAGAAGAGACCCTCAATCCTTGCCCTTTCTCGGCAAAAGTTACCCCAGCTTCCGGGAACTTCTA TTGAAGGAGTTGAAAAGGGTGGCTACATCATTTCAGACAACTCATCAGGTAACAAGCCTGATGTGATCTTGCTGAGCACT GGTTCTGAGTTGGAAATTGCCGCCGCTGCTGGTGAGGATCTAAGGAAGGAAGGAAAAACTGTTAGAGTTGTTTCTTTTGT TAGCTGGGAACTTTTTGATGACCAGTCAGATGAATACAAGGAGAGTGTTCTCCCTGCTGCTGTGACAGCTAGAGTTAGCA TTGAGGCAGCATCAACCTTTGGTTGGCATAAGCTTGTTGGAAGCAAAGGAAAAGCCATAGGCATTGATCGATTCGGAGCA AGTGCTCCAGCAGGAAAAATATATAAGGAGTTCGGTATCACCAAGGAAGCTGTTATTGCTGCTGCCAAAGAAGTTTCTTA G
Protein sequence (LotjaGi5g1v0360800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSSSLHLSQALAVNLHGGFNSSSSSSDRVALSNSFPAFSGLKSHSSCKHAATPSRRRVGGTTTSTMVRATAVETLDKT AEVSLVEKSVNTIRFLSIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLA GYDSVKEEDLKEFRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGC QMEGISNEACSLAGHWGLGKLIALYDDNHISIDGDTEIAFTENVDKRFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVKD KPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPHEPFHVPEEVKKHWSRHVPEGAALEAEWNAKFAEYE KKYKEDAEELKSIITGVLPAGWEKALPTYTPENPGDATRNLSQQNLNALAKVLPGLIGGSADLASSNMTLLKSYGDFQKD TPEERNVRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAAIRISALSEAGVIYVMTHDSIGLGEDGPTHQPIE HLASFRAMPNVLMLRPADGNETAGSYKVAVLNKKRPSILALSRQKLPQLPGTSIEGVEKGGYIISDNSSGNKPDVILLST GSELEIAAAAGEDLRKEGKTVRVVSFVSWELFDDQSDEYKESVLPAAVTARVSIEAASTFGWHKLVGSKGKAIGIDRFGA SAPAGKIYKEFGITKEAVIAAAKEVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | - | – | |
| PANTHER | 1 | 746 | 746 | 0.0 | ||
| Phobius | 1 | 1 | 1 | - | – | |
| PANTHER | 1 | 746 | 746 | 0.0 | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| Phobius | 10 | 14 | 5 | - | – | |
| Phobius | 15 | 746 | 732 | - | – | |
| MobiDBLite | 43 | 62 | 20 | - | – | |
| SUPERFAMILY | 79 | 404 | 326 | 9.48E-118 | ||
| Gene3D | 83 | 411 | 329 | 2.0E-138 | – | |
| Pfam | 88 | 419 | 332 | 1.4E-152 | ||
| TIGRFAM | 88 | 745 | 658 | 4.2E-285 | ||
| CDD | 91 | 358 | 268 | 7.53464E-147 | ||
| ProSitePatterns | 94 | 114 | 21 | - | ||
| Gene3D | 412 | 618 | 207 | 3.0E-82 | – | |
| SUPERFAMILY | 418 | 609 | 192 | 8.41E-66 | ||
| SMART | 436 | 608 | 173 | 4.5E-60 | ||
| Pfam | 437 | 607 | 171 | 8.0E-45 | ||
| CDD | 440 | 603 | 164 | 1.31841E-63 | – | |
| ProSitePatterns | 550 | 566 | 17 | - | ||
| SUPERFAMILY | 612 | 745 | 134 | 5.42E-39 | ||
| Gene3D | 619 | 745 | 127 | 6.8E-42 | ||
| Pfam | 632 | 738 | 107 | 2.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Transketolase activity | Catalysis of the reversible transfer of a 2-carbon ketol group (CH2OH-CO-) from a ketose phosphate donor to an aldose phosphate acceptor. |
Expression pattern of LotjaGi5g1v0360800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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