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Nucleosome assembly protein (NAP)
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Nucleosome assembly | The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: protein SET-like [Glycine max] gi|356562830|ref|XP_003549671.1| | 5 | ||
| – | PREDICTED: protein SET-like isoform 1 [Glycine max] gi|356516792|ref|XP_003527077.1| | 7 | ||
| – | PREDICTED: LOW QUALITY PROTEIN: nucleosome assembly protein 1-like 1-like [Glycine max] gi|356550428|ref|XP_003543589.1| | 7 | ||
| – | PREDICTED: protein SET-like [Glycine max] gi|356562830|ref|XP_003549671.1| | 5 | ||
| – | PREDICTED: nucleosome assembly protein 1-like 1-like [Vitis vinifera] gi|225444889|ref|XP_002281573.1| | 6 | ||
| – | PREDICTED: nucleosome assembly protein 1-like 1-like [Vitis vinifera] gi|225444889|ref|XP_002281573.1| | 6 | ||
| – | PREDICTED: nucleosome assembly protein 1-like 1-A-like isoform X2 [Cicer arietinum] gi|502085963|ref|XP_004488064.1| | 5 | ||
| – | PREDICTED: nucleosome assembly protein 1-like 1-A-like isoform X2 [Cicer arietinum] gi|502085963|ref|XP_004488064.1| | 5 | ||
| – | Nucleosome assembly protein 1-like 1; TAIR: AT1G18800.1 NAP1-related protein 2; Swiss-Prot: sp|Q8LC68|NRP2_ARATH NAP1-related protein 2; TrEMBL-Plants: tr|I3S2R2|I3S2R2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0218800 | 9 | ||
| – | Nucleosome assembly protein 1-like 1; TAIR: AT2G19480.3 nucleosome assembly protein 1;2; Swiss-Prot: sp|Q70Z18|NAP1B_TOBAC Nucleosome assembly protein 1;2; TrEMBL-Plants: tr|I3SQ70|I3SQ70_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0026700 | 9 | ||
| – | Nucleosome assembly protein 1 2; TAIR: AT1G74560.1 NAP1-related protein 1; Swiss-Prot: sp|Q9CA59|NRP1_ARATH NAP1-related protein 1; TrEMBL-Plants: tr|I3S445|I3S445_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0482100_LC | 7 | ||
| – | Testis-specific Y-encoded-like protein 1; TAIR: AT1G74560.1 NAP1-related protein 1; Swiss-Prot: sp|Q9CA59|NRP1_ARATH NAP1-related protein 1; TrEMBL-Plants: tr|I3S445|I3S445_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0482100_LC | 7 | ||
| – | Nucleosome assembly protein 1-like 1; TAIR: AT2G19480.3 nucleosome assembly protein 1;2; Swiss-Prot: sp|Q70Z17|NAP1C_TOBAC Nucleosome assembly protein 1;3; TrEMBL-Plants: tr|I1MSG1|I1MSG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0310600 | 8 | ||
| – | Nucleosome assembly protein 1-like 1; TAIR: AT5G56950.1 nucleosome assembly protein 1;3; Swiss-Prot: sp|Q70Z18|NAP1B_TOBAC Nucleosome assembly protein 1;2; TrEMBL-Plants: tr|I3SY61|I3SY61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0230600 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 7.14 |