Domain Predictions — View

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PF01132

Source: Pfam

Description

Elongation factor P (EF-P) OB domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003746 View details of GO:0003746 AmiGO InterPro QuickGO	Molecular function	Translation elongation factor activity	Functions in chain elongation during polypeptide synthesis at the ribosome.	Subterm of GO:0008135
GO:0006414 View details of GO:0006414 AmiGO InterPro QuickGO	Biological process	Translational elongation	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.	Subterm of GO:0034645 Part of GO:0006412

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0182299.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor P-like [Cicer arietinum] gi\|502134670\|ref\|XP_004502202.1\|	Domains G3DSA:2.40.50.140 IPR001059 IPR012340 PF01132 PTHR30053 PTHR30053:SF1 SM01185 SSF50249	8
Lj1g3v2482390.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor P-like [Cicer arietinum] gi\|502104488\|ref\|XP_004492556.1\|	Domains Coil G3DSA:2.30.30.30 G3DSA:2.40.50.140 IPR001059 IPR008991 IPR012340 IPR013185 IPR014722 NON_CYTOPLASMIC_DOMAIN PF01132 PF08207 PTHR30053 PTHR30053:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50104 SSF50249 SignalP-TM_GRAM_POSITIVE	20
Lj1g3v2482390.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor P-like [Cicer arietinum] gi\|502104488\|ref\|XP_004492556.1\|	Domains G3DSA:2.30.30.30 G3DSA:2.40.50.140 IPR001059 IPR008991 IPR011768 IPR012340 IPR013185 IPR013852 IPR014722 IPR015365 MF_00141 NON_CYTOPLASMIC_DOMAIN PF01132 PF08207 PF09285 PS01275 PTHR30053 PTHR30053:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00841 SM01185 SSF50104 SSF50249 SignalP-TM_GRAM_POSITIVE TIGR00038 cd04470 cd05794	30
LotjaGi1g1v0456600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor P; TAIR: AT3G08740.1 elongation factor P (EF-P) family protein; Swiss-Prot: sp\|Q54760\|EFP_SYNE7 Elongation factor P; TrEMBL-Plants: tr\|I3T3T8\|I3T3T8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0456600	Domains G3DSA:2.30.30.30 G3DSA:2.40.50.140 IPR001059 IPR008991 IPR011768 IPR012340 IPR013185 IPR013852 IPR014722 IPR015365 IPR020599 MF_00141 NON_CYTOPLASMIC_DOMAIN PF01132 PF08207 PF09285 PS01275 PTHR30053 PTHR30053:SF12 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00841 SM01185 SSF50104 SSF50249 SignalP-TM TIGR00038 cd04470 cd05794	31
LotjaGi6g1v0031100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor P; TAIR: AT4G26310.1 elongation factor P (EF-P) family protein; Swiss-Prot: sp\|A4YTY9\|EFP_BRASO Elongation factor P; TrEMBL-Plants: tr\|A0A0L9T427\|A0A0L9T427_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0031100	Domains G3DSA:2.30.30.30 G3DSA:2.40.50.140 IPR001059 IPR008991 IPR012340 IPR013185 IPR013852 IPR014722 IPR015365 IPR020599 PF01132 PF08207 PF09285 PS01275 PTHR30053 PTHR30053:SF14 SM00841 SM01185 SSF50104 SSF50249 SignalP-TM mobidb-lite	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00