Domain Predictions — View

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PF09285

Source: Pfam

Description

Elongation factor P, C-terminal

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005737 View details of GO:0005737 AmiGO InterPro QuickGO	Cellular component	Cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.	Subterm of GO:0044424
GO:0043043 View details of GO:0043043 AmiGO InterPro QuickGO	Biological process	Peptide biosynthetic process	The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.	Subterm of GO:0006518 GO:0043604 GO:1901566

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v2482390.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor P-like [Cicer arietinum] gi\|502104488\|ref\|XP_004492556.1\|	Domains G3DSA:2.30.30.30 G3DSA:2.40.50.140 IPR001059 IPR008991 IPR011768 IPR012340 IPR013185 IPR013852 IPR014722 IPR015365 MF_00141 NON_CYTOPLASMIC_DOMAIN PF01132 PF08207 PF09285 PS01275 PTHR30053 PTHR30053:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00841 SM01185 SSF50104 SSF50249 SignalP-TM_GRAM_POSITIVE TIGR00038 cd04470 cd05794	30
LotjaGi1g1v0456600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor P; TAIR: AT3G08740.1 elongation factor P (EF-P) family protein; Swiss-Prot: sp\|Q54760\|EFP_SYNE7 Elongation factor P; TrEMBL-Plants: tr\|I3T3T8\|I3T3T8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0456600	Domains G3DSA:2.30.30.30 G3DSA:2.40.50.140 IPR001059 IPR008991 IPR011768 IPR012340 IPR013185 IPR013852 IPR014722 IPR015365 IPR020599 MF_00141 NON_CYTOPLASMIC_DOMAIN PF01132 PF08207 PF09285 PS01275 PTHR30053 PTHR30053:SF12 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00841 SM01185 SSF50104 SSF50249 SignalP-TM TIGR00038 cd04470 cd05794	31
LotjaGi6g1v0031100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor P; TAIR: AT4G26310.1 elongation factor P (EF-P) family protein; Swiss-Prot: sp\|A4YTY9\|EFP_BRASO Elongation factor P; TrEMBL-Plants: tr\|A0A0L9T427\|A0A0L9T427_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0031100	Domains G3DSA:2.30.30.30 G3DSA:2.40.50.140 IPR001059 IPR008991 IPR012340 IPR013185 IPR013852 IPR014722 IPR015365 IPR020599 PF01132 PF08207 PF09285 PS01275 PTHR30053 PTHR30053:SF14 SM00841 SM01185 SSF50104 SSF50249 SignalP-TM mobidb-lite	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33