Domain Predictions — View

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PF06547

Source: Pfam

Description

Protein of unknown function (DUF1117)

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0245049.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi\|502081845\|ref\|XP_004486987.1\|	Domains G3DSA:3.30.40.10 IPR001841 IPR010543 IPR013083 PF06547 PF13639 PF14369 PS50089 PTHR22763 PTHR22763:SF42 SM00184 SSF57850 cd00162	13
Lj2g3v1472950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi\|502148453\|ref\|XP_004507169.1\|	Domains G3DSA:3.30.40.10 IPR001841 IPR010543 IPR013083 PF06547 PF13639 PF14369 PS50089 PTHR22763 PTHR22763:SF42 SM00184 SSF57850 cd00162 mobidb-lite	14
Lj2g3v2610960.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.30.40.10 IPR001841 IPR010543 IPR013083 PF06547 PF13639 PF14369 PS50089 PTHR22763 PTHR22763:SF42 SM00184 SSF57850 cd00162 mobidb-lite	14
Lj2g3v2610970.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi\|502137712\|ref\|XP_004503159.1\|	Domains G3DSA:3.30.40.10 IPR001841 IPR010543 IPR013083 PF06547 PF13639 PF14369 PS50089 PTHR22763 PTHR22763:SF26 SM00184 SSF57850 cd00162 mobidb-lite	14
Lj2g3v2612000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi\|502137712\|ref\|XP_004503159.1\|	Domains G3DSA:3.30.40.10 IPR001841 IPR010543 IPR013083 PF06547 PF13639 PS50089 PTHR22763 PTHR22763:SF42 SM00184 SSF57850 cd00162 mobidb-lite	13
LotjaGi1g1v0088400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT5G59550.2 zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp\|Q940T5\|RDUF2_ARATH E3 ubiquitin-protein ligase RDUF2; TrEMBL-Plants: tr\|I1JI05\|I1JI05_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0088400	Domains G3DSA:3.30.40.10 IPR001841 IPR010543 IPR013083 IPR039525 PF06547 PF13639 PF14369 PS50089 PTHR15710 PTHR15710:SF54 SM00184 SSF57850 cd16667 mobidb-lite	15
LotjaGi3g1v0285400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp\|Q9SNB6\|RDUF1_ARATH E3 ubiquitin-protein ligase RDUF1; TrEMBL-Plants: tr\|Q2HS43\|Q2HS43_MEDTR Zinc finger, C3HC4 type (RING finger) protein, putative; Found in the gene: LotjaGi3g1v0285400	Domains G3DSA:3.30.40.10 IPR001841 IPR010543 IPR013083 IPR039525 PF06547 PF13639 PF14369 PS50089 PTHR15710 PTHR15710:SF69 SM00184 SSF57850 cd16669	14
LotjaGi6g1v0063000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT2G39720.1 RING-H2 finger C2A; Swiss-Prot: sp\|O22283\|RHC2A_ARATH Probable E3 ubiquitin-protein ligase RHC2A; TrEMBL-Plants: tr\|V7CZ69\|V7CZ69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0063000	Domains G3DSA:3.30.40.10 IPR001841 IPR010543 IPR013083 IPR039525 PF06547 PF13639 PF14369 PS50089 PTHR15710 PTHR15710:SF54 SM00184 SSF57850 cd16667 mobidb-lite	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	12.50