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PF14369

Source: Pfam

Description

zinc-ribbon

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0061630
Molecular function Ubiquitin protein ligase activity Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
Subterm of

Associated Lotus transcripts 30

Transcript Name Description Predicted domains Domain count
Lj0g3v0245049.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi|502081845|ref|XP_004486987.1|
Domains
13
Lj0g3v0258229.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max] gi|356500343|ref|XP_003518992.1|
Domains
12
Lj0g3v0283079.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max] gi|356567978|ref|XP_003552191.1|
Domains
4
Lj1g3v0786230.1
– RING finger protein [Medicago truncatula] gi|357461573|ref|XP_003601068.1|
Domains
12
Lj1g3v0786240.1
– RING finger protein [Medicago truncatula] gi|357461573|ref|XP_003601068.1|
Domains
12
Lj1g3v0786240.2
– PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi|502126695|ref|XP_004499404.1|
Domains
12
Lj2g3v0609810.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Cicer arietinum] gi|502173204|ref|XP_004515274.1|
Domains
12
Lj2g3v1472950.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi|502148453|ref|XP_004507169.1|
Domains
14
Lj2g3v2610960.1
–
Domains
14
Lj2g3v2610970.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum] gi|502137712|ref|XP_004503159.1|
Domains
14
Lj2g3v3007300.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine max] gi|356554225|ref|XP_003545449.1|
Domains
12
Lj5g3v2258550.1
– RING finger protein [Medicago truncatula] gi|357444887|ref|XP_003592721.1|
Domains
11
Lj5g3v2258560.1
– RING finger protein [Medicago truncatula] gi|357444887|ref|XP_003592721.1|
Domains
11
Lj5g3v2259680.1
– PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Cicer arietinum] gi|502121263|ref|XP_004497245.1|
Domains
12
Lj5g3v2259690.1
– PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Cicer arietinum] gi|502121263|ref|XP_004497245.1|
Domains
12
Lj6g3v1008200.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine max] gi|356554225|ref|XP_003545449.1|
Domains
12
Lj6g3v1008210.1
– PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine max] gi|356554225|ref|XP_003545449.1|
Domains
4
LotjaGi1g1v0053500.1
– RING/U-box superfamily protein; TAIR: AT2G40830.1 RING-H2 finger C1A; Swiss-Prot: sp|O22197|RHC1A_ARATH Probable E3 ubiquitin-protein ligase RHC1A; TrEMBL-Plants: tr|A0A151QZ96|A0A151QZ96_CAJCA RING finger protein 126 family; Found in the gene: LotjaGi1g1v0053500
Domains
13
LotjaGi1g1v0053500.2
– RING/U-box superfamily protein; TAIR: AT2G40830.1 RING-H2 finger C1A; Swiss-Prot: sp|O22197|RHC1A_ARATH Probable E3 ubiquitin-protein ligase RHC1A; TrEMBL-Plants: tr|A0A151QZ96|A0A151QZ96_CAJCA RING finger protein 126 family; Found in the gene: LotjaGi1g1v0053500
Domains
13
LotjaGi1g1v0088400.1
– RING/U-box superfamily protein; TAIR: AT5G59550.2 zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q940T5|RDUF2_ARATH E3 ubiquitin-protein ligase RDUF2; TrEMBL-Plants: tr|I1JI05|I1JI05_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0088400
Domains
15
LotjaGi1g1v0257800.1
– RING/U-box superfamily protein, putative; TAIR: AT1G60360.1 RING/U-box superfamily protein; Swiss-Prot: sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1; TrEMBL-Plants: tr|A0A1J7HBW1|A0A1J7HBW1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0257800
Domains
13
LotjaGi2g1v0180200.1
– RING/U-box superfamily protein; TAIR: AT3G19950.2 RING/U-box superfamily protein; Swiss-Prot: sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1; TrEMBL-Plants: tr|A0A0L9VIQ9|A0A0L9VIQ9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0180200
Domains
13
LotjaGi2g1v0207100.1
– E3 ubiquitin-protein ligase RING1; TAIR: AT3G19950.2 RING/U-box superfamily protein; Swiss-Prot: sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like; TrEMBL-Plants: tr|A0A151TWL1|A0A151TWL1_CAJCA E3 ubiquitin-protein ligase rnf181 family; Found in the gene: LotjaGi2g1v0207100
Domains
4
LotjaGi3g1v0128300_LC.1
– RING/U-box superfamily protein; TAIR: AT3G60080.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8; TrEMBL-Plants: tr|V7BVQ9|V7BVQ9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0128300_LC
Domains
12
LotjaGi3g1v0128300_LC.2
– RING/U-box superfamily protein; TAIR: AT3G60080.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8; TrEMBL-Plants: tr|V7BVQ9|V7BVQ9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0128300_LC
Domains
12
LotjaGi3g1v0285400.1
– RING/U-box superfamily protein; TAIR: AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q9SNB6|RDUF1_ARATH E3 ubiquitin-protein ligase RDUF1; TrEMBL-Plants: tr|Q2HS43|Q2HS43_MEDTR Zinc finger, C3HC4 type (RING finger) protein, putative; Found in the gene: LotjaGi3g1v0285400
Domains
14
LotjaGi5g1v0132600.1
– RING/U-box superfamily protein; TAIR: AT2G40830.1 RING-H2 finger C1A; Swiss-Prot: sp|O22197|RHC1A_ARATH Probable E3 ubiquitin-protein ligase RHC1A; TrEMBL-Plants: tr|I3SUR7|I3SUR7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0132600
Domains
13
LotjaGi5g1v0353500.1
– RING/U-box superfamily protein; TAIR: AT5G64920.1 COP1-interacting protein 8; Swiss-Prot: sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8; TrEMBL-Plants: tr|V7BE55|V7BE55_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0353500
Domains
12
LotjaGi6g1v0031300.1
– RING/U-box superfamily protein; TAIR: AT5G56340.1 RING/U-box superfamily protein; Swiss-Prot: sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1; TrEMBL-Plants: tr|A0A151U8J5|A0A151U8J5_CAJCA RING finger protein 115; Found in the gene: LotjaGi6g1v0031300
Domains
14
LotjaGi6g1v0063000.1
– RING/U-box superfamily protein; TAIR: AT2G39720.1 RING-H2 finger C2A; Swiss-Prot: sp|O22283|RHC2A_ARATH Probable E3 ubiquitin-protein ligase RHC2A; TrEMBL-Plants: tr|V7CZ69|V7CZ69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0063000
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 3.33