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Coatomer (COPI) alpha subunit C-terminus
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | COPI vesicle coat | One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: coatomer subunit alpha-1-like isoform X1 [Cicer arietinum] gi|502149340|ref|XP_004507488.1| | 5 | ||
| – | PREDICTED: coatomer subunit alpha-1-like [Cicer arietinum] gi|502118198|ref|XP_004496148.1| | 4 | ||
| – | Coatomer alpha subunit-like protein [Lotus japonicus] gi|33945873|emb|CAE45585.1| | 14 | ||
| – | Coatomer subunit alpha; TAIR: AT2G21390.1 Coatomer, alpha subunit; Swiss-Prot: sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2; TrEMBL-Plants: tr|Q70I39|Q70I39_LOTJA Coatomer subunit alpha; Found in the gene: LotjaGi3g1v0513100 | 26 | ||
| – | Coatomer subunit alpha; TAIR: AT2G21390.1 Coatomer, alpha subunit; Swiss-Prot: sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2; TrEMBL-Plants: tr|Q70I39|Q70I39_LOTJA Coatomer subunit alpha; Found in the gene: LotjaGi3g1v0513100 | 26 | ||
| – | Coatomer subunit alpha; TAIR: AT1G62020.1 Coatomer, alpha subunit; Swiss-Prot: sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1; TrEMBL-Plants: tr|V7BIE1|V7BIE1_PHAVU Coatomer subunit alpha; Found in the gene: LotjaGi5g1v0253000 | 27 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00200 | CDD | 1 | 16.67 |