Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0513100 |
| Transcript ID | LotjaGi3g1v0513100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coatomer subunit alpha; TAIR: AT2G21390.1 Coatomer, alpha subunit; Swiss-Prot: sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2; TrEMBL-Plants: tr|Q70I39|Q70I39_LOTJA Coatomer subunit alpha; Found in the gene: LotjaGi3g1v0513100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92975829..92980709) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTGACGAAATTCGAGACCAAAAGTAACAGAGTCAAGGGGCTCAGTTTCCACACCAAGAGACCCTGGATCCTTGCCAG TCTTCACAGTGGTGTGATCCAGCTATGGGACTACCGGATGGGGACTCTCATTGACAGATTCGACGAGCACGATGGTCCTG TCAGGGGCGTTCATTTCCACAATTCTCAACCTCTCTTTGTATCTGGAGGTGAATTATTCTCAATCCTCTTCGTCATTCTG CAAAATTGCTATTGCTTTAGATTCCTTATTACTCTGATCCGTTAATTGTTGTTTTTCTTCATTGCTCTGTTGTGTATATC TAAATGAAGATCATAGATCTATCACTCTTAGTGAATGAAACAGCAATGTTGTAGTTTTTGGAGAATTATTATGTGTGTGA TGTGATGTCTCAGATTCAAATAATTTGATGAAACAAGGCTATACCGCGAGCATTACGAATGGGGATACCCTTTATATGTT TTAAAGATTCATTTGTGCAATTGAAATCCTCTGGATCTGGAATTAATATCAAACTTATTTTTTGAGCATAGTTGTGTTTC ATGACATCTTATTCTAATGGTTGGGATTTAATTTGATTTTTCAATAGTTTCATTTGTCACTTGAGGTGGAGGAGATTTCG ATGCATTATTTACGCACATTGATAAAATAGATTATTATTGCATCATGGAAAGTTGAGTTTTACTTTTTTATACGATTTGC AGCTTGTTAATTAATAATTTTTCATTGGGACAGGGGATGATTACAAGATTAAGGTTTGGAACTATAAGATGCATAGGTGT TTGTTCACTCTGCTAGGACACCTTGATTATATTCGTACCGTGCAATTTCATCATGAGAATCCATGGATTGTGAGTGCCAG TGATGATCAAACCATTCGCATCTGGAACTGGCAGTCACGTACCTGTATATCTGTTTTGACTGGGCACAATCATTATGTTA TGTGTGCCTCGTTCCATCCAAAAGAGGATATTGTTGTGTCAGCCTCCTTGGATCAGACTGTTCGTGTTTGGGATATTGGT TCTCTCAAACGGAAGGCTGGACCTCCTGCAGATGACATTCTGCGATTGAGCCAGATGAACACAGATCTTTTTGGTGGTGT TGATGCGGTTGTTAAGTATGTATTGGAAGGTCATGACCGAGGTGTCAACTGGGCTGCTTTTCATCCTACACTGCCTCTCA TTGTCTCAGGAGCTGATGACCGACAAGTGAAACTTTGGAGAATGAATGGTAAATTTGAAGCCTTGATATTTACTTTATGT TGTCCTAAATAATAAGTACCCATGAATATTCTTGAATTCCATTTTTTGTTCTCTGAGTGCGATTTGGGTAATTAATTTTA ACAAATTGATTGTATTTGTTGAGGGGATTTTAAATTACTTAATCCAAAATTGATTATTTGGATGTCAAGAGAATTTTGAA AATACTAGGTAACTTTAGGTACTTTCCTAACTCCAAAGAAGGGATTTGAAATTCCACCATCTTTGAAGGATCTCTAATCT CTCCTCTCATGTCTAACTGCTCGCAAGGTTATTGATATTCATCTAATTTCTCACATATATATCCACACTAAATATGTTGT AAATGACAACCATGAAAATACATCAATTTAATTTCTCAGTATTTTAAATTAATTGAAATTTTAAATTGATTCATCCAGAC ATAGAGTAAAGCTCACCTGACTGGGCTTTCATATATTGTTTTGATGCTATCCACATTCTTAGAAATATTAAAAAAGCAGT ATTTGGAGGATCTTACAAGTATTGTTGGCCACAAAACTACCTTCCGTACAAGAAGTTATTGCATGCATTATTGTTGTATT TAATTAATCAAAAAGAAAATCTTAGTATTTTTGGTGATCTTCTCTAAGTCCCTAATAAAATTTGGTTTTCATTTTCAGAC ACCAAGGCATGGGAAGTGGATACTTTGAGAGGGCACATGAATAATGTTTCTTGTGTTATGTTCCATGCCAAACAAGATAT TATTGTGTCAAATTCTGAGGATAAAAGCATTCGAGTATGGGATGCAACAAAGCGGACTGGAATTCAAACCTTCCGCAGGG AGCATGATCGGTTTTGGATTCTTGCAACACATCCTGAGATGAATCTGTTAGCAGCTGGTCATGACAGTGGCATGATAGTT TTTAAATTGGAGAGAGAAAGGCCTGCTTTCGCAGTTAGTGGTGATTCTTTGTTCTACGCAAAAGACCGGTTTTTGCGCTT CTATGAATTTTCAACCCAGAGAGAGACACAAGTACTTACAATCCGACGACCTGGTTCTTTAAGTCTGAATCAAAGTCCAA AGACCCTTTCCTACAGCCCTAGTGAAAATGCAGTTCTTCTCTGTTCAGATGTGGATGGTGGATCTTATGAATTTTATTGC ATATCCAAGGATGGCATTAAGGATAGTTTTGGTAGGGGTGACACGCAAGATCCAAAGAAAGGCCTTGGAGGTTCAGCAGT CTTTGTGGCTCGGAATAGGTTTGCTGTGCTTGACAAAGGCAGCAACCAAGTCTTTGTAAAAAATCTGAAGAATGAGCTTG TTAAGAAGAGTGTCCTCCCAATTGCCACTGATGCTATATTCTATGCTGGAACAGGCAACTTGCTATGCAGGTCAGAGGAT AGGGTTTTTATATTTGATCTTCAGCAGAGGCTTGTTCTTGGTGATCTCCAAACCCCTTTTATCAAGTATGTAATCTGGTC TAATGACATGGAAAGTGTTGCTTTGCTCAGCAAACATGCAATTGTTATTGCTAGCAAGAAGCTCGTGCACCAATGCACCC TCCATGAGACAATCCGTGTAAAAAGTGGAGCCTGGGATGAAAATGGCGTTTTTATTTACACAACATTAAATCATATCAAA TATTGCCTCCCCAATGGAGATAGTGGGATAATAAAAACATTGGATGTCCCAATTTACATCACAAAGGTTGTTGGAAACAC CATCTTCTGCTTGGGTCGGGATGGAAAGAACAGAGCTATAACTATTGATGCAACTGAATATGTCTTTAAGCTTTCCTTGT TGAAGAAAAGGTATGACCATGTGATGAACATGATAAGGAACTCACAGCTTTGTGGGCAGGCTATGATTGCTTATCTACAA CAGAAAGGGTTCCCTGAGGTTGCCCTCCATTTTGTGAAAGATGAGAGAATTCGGTTCAATTTGGCTATAGAAAGTGGGAA TATTCAAATTGCAGTTGCGTCAGCTACAGCAATTGATGAGAAAGATCACTGGTACCGTCTAGGGATTGAAGCTCTTCGTC AAGGCAATGCTGGGATAGTAGAGTATGCATACCAGAGGACCAAAAATTTTGAGAGATTGTCTTTCCTTTATCTTATTACT GGTAATGTGGAGAAACTTTCAAAGATGTTGAAAATTGCTGAAGTCAAGAATGATGTGATGGGCCAGTTTCACAATGCCCT GTATATGGGTGATATCCGAGAGCGTGTTAAGATCTTGGAGAATGTGGGCCATCTGCCTCTTGCTTATATCACTGCATCAG TCCATGGGCTCCATGATGTTGCTGAAAGGCTTGCAACTGAACTGGGGGATAATGTTCCATCTTTGCCTGAGGGGAAAGTA CCGTCTCTCTTGATTCCACCATCACCTGTATTGAGTGGTGGTGATTGGCCCCTTCTTAGGGTCATGCGAGGCATATTTGA TGGTGGGTTTAATCAGACAGATAGAGATGCTGATGAGGAAGAGTATGAGGCTGCTGATGGTGATTGGGGTGAGGAGCTTG ACATGGTTGATGTTGATGGGTTACAAAATGGAGATGTTGCTGCGATTTTGGATGATGGAGAGGTCGGTGAAGAGGGTGAT GAAGAGGGTGGGTGGGAGATGGAAGATTTGGAGCTCCCCCCTGAAGCTGAAACTCCAAAAGCTTCTGTCAGCTCACGGTC TTCAGTTTTTGTGACTCCTACACCTGGGATGGCAGTTAGCCAGATATGGATTCAGAGGTCATCTCTTGCAGCTGATCATG CAGCTGCTGGCAATTTTGACACTGCAATGAGATTACTGAACAGGCAACTTGGGATAAAAAACTTTGCTCCCTTGAAATCT CTGTTCCTAGACCTTCATTCTGGCAGCCATTCATATCTGCGCGCCTTTTCATCTGCTCCAGTTGTATCACTTGCTGTTGA AAGAGGCTGGAATGAGTCATCTAGTCCAAATGTGAGAGGCCCACCGGCACTTCCTTTCAAATTGCCTCAATTAGATGAAA AGCTCAAAGCTGGATATAAGGCAACAACTGCTGGGAAATTTACTGAGGCTCTCCGCACATTTGTCAATATTCTTAATACA ATTCCTTTGATTGTTGTGGAGTCAAGGAGGGAAGTTGATGATGTGAAGGAATTGATCATCATAGTCAAAGAGTATGTTCT GGGTCTGAAGATGGAGCTGAAAAGAAGGGAAATTAAGGACGACCCAGCCCGCCAGCAAGAGCTTGCAGCATATTTCACCC ACTGCAATCTTCAGACACCTCACTTGCGGCTTGCTTTGCTGAATGCAATGACTGTCTGCTACAAGGCCAAGAACCTCGCC ACCGCTGCAAACTTTGCCAGGAGGCTGCTTGAGACCAACCCTAACATTGAAAACCAAGCTAAGACAGCAAGGCAAGTTCT AGCAGCTGCAGAAAAGAACATGACTGATGCAACAGAGTTGAACTACGATTTCCGAAATCCATTTGTTATTTGCGGATCAA CCTATGTGCCCATTTATCGTGGACAGAAGGATGTTTCTTGCCCATACTGCACTTCCCGTTTTGTGCCAAGCCAGGAGGGT CAGCTATGTGCTGTGTGTGATCTCTCAGTGGTAGGTGCTGATGCTTCTGGATTGCTCTGTTCTCCTTCACAGGTTCGTTG A
CDS sequence (LotjaGi3g1v0513100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGACGAAATTCGAGACCAAAAGTAACAGAGTCAAGGGGCTCAGTTTCCACACCAAGAGACCCTGGATCCTTGCCAG TCTTCACAGTGGTGTGATCCAGCTATGGGACTACCGGATGGGGACTCTCATTGACAGATTCGACGAGCACGATGGTCCTG TCAGGGGCGTTCATTTCCACAATTCTCAACCTCTCTTTGTATCTGGAGGGGATGATTACAAGATTAAGGTTTGGAACTAT AAGATGCATAGGTGTTTGTTCACTCTGCTAGGACACCTTGATTATATTCGTACCGTGCAATTTCATCATGAGAATCCATG GATTGTGAGTGCCAGTGATGATCAAACCATTCGCATCTGGAACTGGCAGTCACGTACCTGTATATCTGTTTTGACTGGGC ACAATCATTATGTTATGTGTGCCTCGTTCCATCCAAAAGAGGATATTGTTGTGTCAGCCTCCTTGGATCAGACTGTTCGT GTTTGGGATATTGGTTCTCTCAAACGGAAGGCTGGACCTCCTGCAGATGACATTCTGCGATTGAGCCAGATGAACACAGA TCTTTTTGGTGGTGTTGATGCGGTTGTTAAGTATGTATTGGAAGGTCATGACCGAGGTGTCAACTGGGCTGCTTTTCATC CTACACTGCCTCTCATTGTCTCAGGAGCTGATGACCGACAAGTGAAACTTTGGAGAATGAATGACACCAAGGCATGGGAA GTGGATACTTTGAGAGGGCACATGAATAATGTTTCTTGTGTTATGTTCCATGCCAAACAAGATATTATTGTGTCAAATTC TGAGGATAAAAGCATTCGAGTATGGGATGCAACAAAGCGGACTGGAATTCAAACCTTCCGCAGGGAGCATGATCGGTTTT GGATTCTTGCAACACATCCTGAGATGAATCTGTTAGCAGCTGGTCATGACAGTGGCATGATAGTTTTTAAATTGGAGAGA GAAAGGCCTGCTTTCGCAGTTAGTGGTGATTCTTTGTTCTACGCAAAAGACCGGTTTTTGCGCTTCTATGAATTTTCAAC CCAGAGAGAGACACAAGTACTTACAATCCGACGACCTGGTTCTTTAAGTCTGAATCAAAGTCCAAAGACCCTTTCCTACA GCCCTAGTGAAAATGCAGTTCTTCTCTGTTCAGATGTGGATGGTGGATCTTATGAATTTTATTGCATATCCAAGGATGGC ATTAAGGATAGTTTTGGTAGGGGTGACACGCAAGATCCAAAGAAAGGCCTTGGAGGTTCAGCAGTCTTTGTGGCTCGGAA TAGGTTTGCTGTGCTTGACAAAGGCAGCAACCAAGTCTTTGTAAAAAATCTGAAGAATGAGCTTGTTAAGAAGAGTGTCC TCCCAATTGCCACTGATGCTATATTCTATGCTGGAACAGGCAACTTGCTATGCAGGTCAGAGGATAGGGTTTTTATATTT GATCTTCAGCAGAGGCTTGTTCTTGGTGATCTCCAAACCCCTTTTATCAAGTATGTAATCTGGTCTAATGACATGGAAAG TGTTGCTTTGCTCAGCAAACATGCAATTGTTATTGCTAGCAAGAAGCTCGTGCACCAATGCACCCTCCATGAGACAATCC GTGTAAAAAGTGGAGCCTGGGATGAAAATGGCGTTTTTATTTACACAACATTAAATCATATCAAATATTGCCTCCCCAAT GGAGATAGTGGGATAATAAAAACATTGGATGTCCCAATTTACATCACAAAGGTTGTTGGAAACACCATCTTCTGCTTGGG TCGGGATGGAAAGAACAGAGCTATAACTATTGATGCAACTGAATATGTCTTTAAGCTTTCCTTGTTGAAGAAAAGGTATG ACCATGTGATGAACATGATAAGGAACTCACAGCTTTGTGGGCAGGCTATGATTGCTTATCTACAACAGAAAGGGTTCCCT GAGGTTGCCCTCCATTTTGTGAAAGATGAGAGAATTCGGTTCAATTTGGCTATAGAAAGTGGGAATATTCAAATTGCAGT TGCGTCAGCTACAGCAATTGATGAGAAAGATCACTGGTACCGTCTAGGGATTGAAGCTCTTCGTCAAGGCAATGCTGGGA TAGTAGAGTATGCATACCAGAGGACCAAAAATTTTGAGAGATTGTCTTTCCTTTATCTTATTACTGGTAATGTGGAGAAA CTTTCAAAGATGTTGAAAATTGCTGAAGTCAAGAATGATGTGATGGGCCAGTTTCACAATGCCCTGTATATGGGTGATAT CCGAGAGCGTGTTAAGATCTTGGAGAATGTGGGCCATCTGCCTCTTGCTTATATCACTGCATCAGTCCATGGGCTCCATG ATGTTGCTGAAAGGCTTGCAACTGAACTGGGGGATAATGTTCCATCTTTGCCTGAGGGGAAAGTACCGTCTCTCTTGATT CCACCATCACCTGTATTGAGTGGTGGTGATTGGCCCCTTCTTAGGGTCATGCGAGGCATATTTGATGGTGGGTTTAATCA GACAGATAGAGATGCTGATGAGGAAGAGTATGAGGCTGCTGATGGTGATTGGGGTGAGGAGCTTGACATGGTTGATGTTG ATGGGTTACAAAATGGAGATGTTGCTGCGATTTTGGATGATGGAGAGGTCGGTGAAGAGGGTGATGAAGAGGGTGGGTGG GAGATGGAAGATTTGGAGCTCCCCCCTGAAGCTGAAACTCCAAAAGCTTCTGTCAGCTCACGGTCTTCAGTTTTTGTGAC TCCTACACCTGGGATGGCAGTTAGCCAGATATGGATTCAGAGGTCATCTCTTGCAGCTGATCATGCAGCTGCTGGCAATT TTGACACTGCAATGAGATTACTGAACAGGCAACTTGGGATAAAAAACTTTGCTCCCTTGAAATCTCTGTTCCTAGACCTT CATTCTGGCAGCCATTCATATCTGCGCGCCTTTTCATCTGCTCCAGTTGTATCACTTGCTGTTGAAAGAGGCTGGAATGA GTCATCTAGTCCAAATGTGAGAGGCCCACCGGCACTTCCTTTCAAATTGCCTCAATTAGATGAAAAGCTCAAAGCTGGAT ATAAGGCAACAACTGCTGGGAAATTTACTGAGGCTCTCCGCACATTTGTCAATATTCTTAATACAATTCCTTTGATTGTT GTGGAGTCAAGGAGGGAAGTTGATGATGTGAAGGAATTGATCATCATAGTCAAAGAGTATGTTCTGGGTCTGAAGATGGA GCTGAAAAGAAGGGAAATTAAGGACGACCCAGCCCGCCAGCAAGAGCTTGCAGCATATTTCACCCACTGCAATCTTCAGA CACCTCACTTGCGGCTTGCTTTGCTGAATGCAATGACTGTCTGCTACAAGGCCAAGAACCTCGCCACCGCTGCAAACTTT GCCAGGAGGCTGCTTGAGACCAACCCTAACATTGAAAACCAAGCTAAGACAGCAAGGCAAGTTCTAGCAGCTGCAGAAAA GAACATGACTGATGCAACAGAGTTGAACTACGATTTCCGAAATCCATTTGTTATTTGCGGATCAACCTATGTGCCCATTT ATCGTGGACAGAAGGATGTTTCTTGCCCATACTGCACTTCCCGTTTTGTGCCAAGCCAGGAGGGTCAGCTATGTGCTGTG TGTGATCTCTCAGTGGTAGGTGCTGATGCTTCTGGATTGCTCTGTTCTCCTTCACAGGTTCGTTGA
Protein sequence (LotjaGi3g1v0513100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHNSQPLFVSGGDDYKIKVWNY KMHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDIVVSASLDQTVR VWDIGSLKRKAGPPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILATHPEMNLLAAGHDSGMIVFKLER ERPAFAVSGDSLFYAKDRFLRFYEFSTQRETQVLTIRRPGSLSLNQSPKTLSYSPSENAVLLCSDVDGGSYEFYCISKDG IKDSFGRGDTQDPKKGLGGSAVFVARNRFAVLDKGSNQVFVKNLKNELVKKSVLPIATDAIFYAGTGNLLCRSEDRVFIF DLQQRLVLGDLQTPFIKYVIWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPN GDSGIIKTLDVPIYITKVVGNTIFCLGRDGKNRAITIDATEYVFKLSLLKKRYDHVMNMIRNSQLCGQAMIAYLQQKGFP EVALHFVKDERIRFNLAIESGNIQIAVASATAIDEKDHWYRLGIEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNVEK LSKMLKIAEVKNDVMGQFHNALYMGDIRERVKILENVGHLPLAYITASVHGLHDVAERLATELGDNVPSLPEGKVPSLLI PPSPVLSGGDWPLLRVMRGIFDGGFNQTDRDADEEEYEAADGDWGEELDMVDVDGLQNGDVAAILDDGEVGEEGDEEGGW EMEDLELPPEAETPKASVSSRSSVFVTPTPGMAVSQIWIQRSSLAADHAAAGNFDTAMRLLNRQLGIKNFAPLKSLFLDL HSGSHSYLRAFSSAPVVSLAVERGWNESSSPNVRGPPALPFKLPQLDEKLKAGYKATTAGKFTEALRTFVNILNTIPLIV VESRREVDDVKELIIIVKEYVLGLKMELKRREIKDDPARQQELAAYFTHCNLQTPHLRLALLNAMTVCYKAKNLATAANF ARRLLETNPNIENQAKTARQVLAAAEKNMTDATELNYDFRNPFVICGSTYVPIYRGQKDVSCPYCTSRFVPSQEGQLCAV CDLSVVGADASGLLCSPSQVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1214 | 1214 | 0.0 | – | |
| PIRSF | 1 | 1217 | 1217 | 0.0 | ||
| Gene3D | 1 | 319 | 319 | 2.6E-125 | ||
| PANTHER | 1 | 1214 | 1214 | 0.0 | – | |
| SMART | 2 | 37 | 36 | 44.0 | ||
| SUPERFAMILY | 4 | 315 | 312 | 5.19E-74 | ||
| ProSiteProfiles | 5 | 326 | 322 | 52.229 | ||
| CDD | 9 | 317 | 309 | 1.8691E-75 | – | |
| SMART | 40 | 79 | 40 | 9.3E-7 | ||
| Pfam | 45 | 79 | 35 | 7.9E-5 | ||
| ProSiteProfiles | 47 | 88 | 42 | 12.881 | ||
| SMART | 82 | 121 | 40 | 3.0E-9 | ||
| Pfam | 84 | 121 | 38 | 2.8E-8 | ||
| ProSiteProfiles | 89 | 130 | 42 | 14.118 | ||
| PRINTS | 108 | 122 | 15 | 3.9E-7 | ||
| SMART | 124 | 163 | 40 | 1.3E-10 | ||
| Pfam | 126 | 163 | 38 | 3.8E-7 | ||
| ProSiteProfiles | 131 | 164 | 34 | 15.22 | ||
| PRINTS | 150 | 164 | 15 | 3.9E-7 | ||
| ProSitePatterns | 150 | 164 | 15 | - | ||
| SMART | 193 | 232 | 40 | 2.9E-6 | ||
| Pfam | 198 | 231 | 34 | 5.1E-4 | ||
| ProSiteProfiles | 200 | 241 | 42 | 13.015 | ||
| SUPERFAMILY | 218 | 552 | 335 | 4.71E-23 | – | |
| SMART | 237 | 276 | 40 | 1.9E-6 | ||
| Pfam | 241 | 276 | 36 | 3.5E-5 | ||
| ProSiteProfiles | 244 | 285 | 42 | 15.087 | ||
| PRINTS | 263 | 277 | 15 | 3.9E-7 | ||
| SMART | 279 | 317 | 39 | 160.0 | ||
| Pfam | 342 | 771 | 430 | 1.1E-127 | ||
| Gene3D | 643 | 816 | 174 | 3.9E-68 | – | |
| Pfam | 818 | 1221 | 404 | 2.2E-169 | ||
| Coils | 1128 | 1155 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Membrane coat | Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules. | ||
| Cellular component | COPI vesicle coat | One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state. |
Expression pattern of LotjaGi3g1v0513100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…