Domain Predictions — View

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PF08127

Source: Pfam

Description

Peptidase family C1 propeptide

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004197 View details of GO:0004197 AmiGO InterPro QuickGO	Molecular function	Cysteine-type endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.	Subterm of GO:0004175 GO:0008234
GO:0050790 View details of GO:0050790 AmiGO InterPro QuickGO	Biological process	Regulation of catalytic activity	Any process that modulates the activity of an enzyme.	Subterm of GO:0065009

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0055079.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cathepsin B-like [Glycine max] gi\|356572872\|ref\|XP_003554589.1\|	Domains G3DSA:3.90.70.10 IPR000169 IPR000668 IPR012599 IPR013128 IPR025660 NON_CYTOPLASMIC_DOMAIN PF00112 PF08127 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF367 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00645 SSF54001 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd02620	24
LotjaGi1g1v0753100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp\|Q4R5M2\|CATB_MACFA Cathepsin B; TrEMBL-Plants: tr\|I3SCV5\|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100	Domains G3DSA:3.90.70.10 IPR000169 IPR000668 IPR012599 IPR025660 IPR038765 NON_CYTOPLASMIC_DOMAIN PF00112 PF08127 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF656 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00645 SSF54001 SignalP-noTM TMhelix cd02620	23
LotjaGi1g1v0753100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp\|Q4R5M2\|CATB_MACFA Cathepsin B; TrEMBL-Plants: tr\|I3SCV5\|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100	Domains G3DSA:3.90.70.10 IPR000169 IPR000668 IPR012599 IPR025660 IPR038765 NON_CYTOPLASMIC_DOMAIN PF00112 PF08127 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF656 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00645 SSF54001 SignalP-noTM TMhelix cd02620	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02620	CDD	1	33.33