Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

cd02620

Source: CDD

Description

Peptidase_C1A_CathepsinB

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0055079.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cathepsin B-like [Glycine max] gi\|356572872\|ref\|XP_003554589.1\|	Domains G3DSA:3.90.70.10 IPR000169 IPR000668 IPR012599 IPR013128 IPR025660 NON_CYTOPLASMIC_DOMAIN PF00112 PF08127 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF367 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00645 SSF54001 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd02620	24
Lj1g3v4819970.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cathepsin B-like [Glycine max] gi\|356505709\|ref\|XP_003521632.1\|	Domains G3DSA:3.90.70.10 IPR000169 IPR000668 IPR013128 IPR025660 PF00112 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF367 SM00645 SSF54001 cd02620	14
LotjaGi1g1v0753100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp\|P07858\|CATB_HUMAN Cathepsin B; TrEMBL-Plants: tr\|I3SCV5\|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100	Domains G3DSA:1.20.5.170 G3DSA:3.90.70.10 IPR000169 IPR000668 IPR025660 IPR038765 PF00112 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF656 SM00645 SSF54001 cd02620	15
LotjaGi1g1v0753100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp\|Q4R5M2\|CATB_MACFA Cathepsin B; TrEMBL-Plants: tr\|I3SCV5\|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100	Domains G3DSA:3.90.70.10 IPR000169 IPR000668 IPR012599 IPR025660 IPR038765 NON_CYTOPLASMIC_DOMAIN PF00112 PF08127 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF656 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00645 SSF54001 SignalP-noTM TMhelix cd02620	23
LotjaGi1g1v0753100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp\|Q4R5M2\|CATB_MACFA Cathepsin B; TrEMBL-Plants: tr\|I3SCV5\|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100	Domains G3DSA:3.90.70.10 IPR000169 IPR000668 IPR012599 IPR025660 IPR038765 NON_CYTOPLASMIC_DOMAIN PF00112 PF08127 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF656 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00645 SSF54001 SignalP-noTM TMhelix cd02620	23
LotjaGi1g1v0753100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cathepsin B-like cysteine protease; TAIR: AT1G02305.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp\|P07858\|CATB_HUMAN Cathepsin B; TrEMBL-Plants: tr\|I3SCV5\|I3SCV5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0753100	Domains G3DSA:1.20.5.170 G3DSA:3.90.70.10 IPR000169 IPR000668 IPR025660 IPR038765 PF00112 PR00705 PS00139 PS00639 PTHR12411 PTHR12411:SF656 SM00645 SSF54001 cd02620	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02620	CDD	1	16.67