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PF08911

Description

NUP50 (Nucleoporin 50 kDa)

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Nuclear pore Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
PREDICTED: brefeldin A resistance protein-like [Glycine max] gi|356556006|ref|XP_003546318.1| 13
PREDICTED: brefeldin A resistance protein-like [Glycine max] gi|356556006|ref|XP_003546318.1| 11
Ran-binding protein 1 domain-containing; TAIR: AT1G52380.1 NUP50 (Nucleoporin 50 kDa) protein; Swiss-Prot: sp|Q9C829|NU50A_ARATH Nuclear pore complex protein NUP50A; TrEMBL-Plants: tr|A0A0B2NU93|A0A0B2NU93_GLYSO E3 SUMO-protein ligase RanBP2; Found in the gene: LotjaGi3g1v0015500 13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 33.33