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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0434600 |
| Transcript ID | LotjaGi2g1v0434600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS class); TAIR: AT4G23440.1 Disease resistance protein (TIR-NBS class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K584|K7K584_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0434600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93095878..93100537) extracted from Lotus japonicus Gifu genome v1.2.
TTATTTTTTAATCTCCAAATTCTTATAAAATGAGTTGACTTTTCTTAAAATTGAAATAATCATGATGAATGTGTAGAAGT GTGTTTTAAACGGAGCGTATTGCTAGTGTTTCTCGAAAATTAAAAAAAAAAGTGATTGAAATATCAGACAGAAGATTGAT TGGTAGAGAGAGTGTGAAAGGGTTAAGTTTAAGGAGTGGAAAAGAGTGCCAGTGGGACATGTTTTTGTTATATACTCTTC TCTTCTCTCTCACTGACTGCTGCTACTGCTACTTGTTACAAAAGAGCGGGCTTCTCAAAAAACAGCTATTGTTTCTGAAC CCTCAAGACTTTGTTTGTTCTTTCCCTATCTCTCTGAAACTCAAAAAACAGGTACAACCTTGTGCCTCCATTTTCAACAA CTTTTATCCTTTTCTCTTTTTCTCTGTAATTGGTGTGTCTCTTCGCTGGAAATGTCTCACTAGTTTGCACTTTTGAATGA TCATTCACTTGATATCAGTTGTATTGGATTTAATTTAATGTGCTTTATTCTTGTAATGATGTGATTCTCATGAAATTCGC AGGTTGGTTGTCTGAGCAATGAGTTTGTTAATTTTAGTGTTGCAGTGCATGTGAATTTTTGAGTTTGTTAATTTTAGTGT TCCTCATTCGTTTCAGAGAAGCAAGATTGATTGGTTGATTGGAGGCAAAACACACAATCTATGAAACTGTGTATTAGTTT GGCATCCTTGTAAGTATTCAGATCTGAATCTTAATGTAGTTTTTATGATTATATAATTGGCTTTCTCATTTTTTTTAATC CGAGATTGTGTTGCTGGTTTGTTCTCTATAATAATGCCTTCTTCTTTGATTTTGAATTTGGTTCATGAATTAAATGGCCA GGAATTCTGTGTGATCAAGTGAACTGGTTTTTTTGGGTCTATATGATATGTCATTGCCCATCAATTGTTTGAGTCAAACA GACACTACCTTTTCTCATGCATTTCCTGTTCAGGATCAAAATCTTTCTGTAAAGTTTTATGCTTTTGACCAATAAAAGAT ACTTTCTGGAATGTAATGAGTATTACATTTAAGTTGATTCTACTGCTGCCTGTTAATGATTTTTCCTGTTTGTGAGTTGA TGAATATAATTTTTCTGTTCATTTCTTTTTGTTGGGTGTGTGTGAATTTTGAGATCTATAACTTACCGTGTGTTTGAATT TCTGTTACACTCACCTGAAAGCACTGTTTTCATCCACCCATTGTGAGACATGAGTTTCTGTCGAAATAACGAAAATATAA ACACACTATTAGACGTTGATGCTACTATCTATTAGTATTTTTCATTTTTATTTCAACTACCATCAACATACCAATGTAGA TCATTCATTTTTTACCATGTTGGTTTTTGGAATACATCTTGTGACTGACAAGGACATTATCCCAATTTCAGAGGGTCTGT TACTGTAAAATGTAAATGATGAGCGTGCTTGGGAATTGATATCTTCATTAATTGGAATCATATCACTATAGGCATGGATA TTCAAGAAGATAGCTCCATGTTTGGGTCTTCGACAGCCATGACCAAAAGGAATGCGTCTTCATCATCTTCAACTTTTTTT TCAGCAAATCAGTCACCATTCTTTTCTCCAAGATCACCAGCACTTCATTTACTAGAGTCAACCAGACCTGATGCTTCAAG TAATAGAATCCAATCAAATTTGGCTCTCCCAAGCACCAGTTCAGGGATTCCAGTACCGCAGTCTCTAGTAAACATTAGAA GTAGCTTCGCAAATGCATCTGCATCTTCCTCAATTGACATCTCTAGCAGCAGCATATCCGGTCACCGCCACCGACATTAT GATGATTATTCTGGACAAAAAGAGAAGCAAATGAAAACAGAAAGAAATCAAAGAACATCATCAACCACAGGTTCCACATC ACTTTCTTCTTATAGACTGAGGAATTGTGATGTTTTCATAGGATTCCATGGTGGGAAGACTCCTTTACTTCGATTTGTTA ACTGGCTCCGCGCTGAGTTAGAAATTCAAGGAATCAGTTGCTTTGTATCGGACAGGGCTCGATGTAGGAAGTCTCGCAAA CTTGGCATGGTGGAGAGAGCCATGGATGCTGCTTCTTTTGGGATAGTAATCATTACAAGGAAGTCTTTCAAGAACCCGTA CACCATTGAGGAGCTGCAGTTTTTTTCTAGCAAGAAGAATTTGGTCCCTATATACTTTGATTTGAGTCCAGCTGATTGTC TTGTGAGGGATATAATTGAAAAGAGGGGCGAGGTGTGGGAAAAACATGGAGGGGAACTTTGGCTCTCATATGAAGGGATA GAACAGGAGTGGAAAGATGCAGTGCATGGACTCTCTCGGATTGATGAATGGAAGTTGGAAGCAAAGGATGGAAACTGGAG AGATTGCATACTGAGGGCTGTCACATTATTAGCAACGAGGTCAGGTAAAAGAAGCGTTGCGGAGCGTTTAACAAAATGGA GAGAGAAGGTAGAAAAAGAGGAGTTTCCTTTCACCAGAAATGAGAATTTTATTGGCAGAAAGAAAGAGCTTTCGCAGTTG GAATTTATGTTGTTTGGTGATGTCACAAGAGATGCAGAGCAAGACTATATTGAACTTAAGGCCAGGCCCAAACAAAAGGA TTTAATAATTGGTTCGGGCAAGGGTATTCTGATAGATGAAAGATGGAGAGGAAGACATATGGGAAATGGCAGCAAGAAGG AAAAAGAATCAGTTGTGTGGAAGGAGTTGGAGAAAGAGATTGAAATGCAAGGCATTGAGTTTTCTCATAGGCACTACCAC AAAAGGCTAAAACGTGGAAAGTATACCAAGAAGAAAAGAGGAATGAAGATTTTGTATGGGAAAGGGATTGCTTGTGTTTC AGGGGATTCAGGAATTGGAAAAACTGAACTTATTCTTGAATTTGCTTATAGATTTCATCAGAGATATAAGATGGTTTTGT GGATAGGAGGGGAGAGAAGATACATAAGGCAAAACTATCTTAATATCAGGTCCTTTTTAGAAGTTGACGTGGGAGTTGAG AATACTTTGGAGAAAACTAAGATACGAAGCTTTGAAGAGCAGGAAGCTGCGGCTATTTCCAGAGTTCGAAAAGAACTAAT GAGGAACGTTCCATATCTTGTGGTCATTGATAACTTGGAAAGTGAAAATGATTGGTGGGATCGCAAATTTGTGATGGATC TTCTCCCTCGGTTTGGTGGAGAGACCCATGTAATTATATCAACACGCCTTCCTTCCGTCATGAATTTGGAACCTTTGAAA CTTTCATACTTATCTGGAGTGGAAGCAATGTCTTTGATGGTAGGAAGTGGCAAGGACTATCCTGTTGCAGAGATTGATGC TTTGAGAACTATTGAGGAGAAAGTTGGAAGATTAACTTTGGGCCTTGCAATTGTCAATTCAATTTTGTCTGAATTACCCA TAACCCCAACCAGGCTCCTAGATACCATAAATAGAATGCCTTTGAAGGACATATCATGGAGTGGTAAAGAAGCTCACATG TTAAGGAAGAACACTTTCCTTCTGCAACTTTTTGATGTTTGTTTCTCCATATTTGATCATGCAGATGGCCCGAGGAGCTT GGCCACCAGAATGGTGCTGGCAAGTGGATGGTTTGCACCTGGTGCAATTCCTGTTTCCTTGTTATCACTTGCTGCTCATA AGATACCAGAAAAATGTCACAAAACCTATTTCTGGAGAAGAACAGTGCAATTATTAGCATGCGGGTTCACGTCTTCATAC ATCCAAAAATCAGAATTGGAAGCGTCTTCTTTGCTGCTAAGGTTTAATATGGCAAGAAGCAGCATGAAGGAAGGCTATAT CCATTTCAATGAGCTCATCAAACTATATGCTCAGAAAAGAGAAGGTTCTGTAGCTGCACAAGCAATGACTCAAGCTATAA TCAGTCACGGGTCAATATCTGAAAATATGGAGCATTTCTGGGCTGCATGTTTTCTGTTATGTGGATTTGGCCATGACCCT GTTGTTGTTGAGCTCAAGGTGTCTGAGCTTTTATACCTTGTCAAGAAAGTTGTTCTGCCCCTTGCAATTCACACATTCAT TACTTTTTCTCGATGCACGGCTGCGCTTGAGCTTCTACGCTTGTGCACCAATGCCTTGGAAGCTGCGGATCAAGCATTCG TTACCCCGGTTGATAAGTGGTTCGACAAAACACTTTGCTGGAGGTCCATCAAGACTAATGCCGAGTTGAATCCTTGCCTT TGGCAAGAGTTAGCTCTGTGTAGAGCCACTGTTCTTGAGACTAGGGCCAAGCTAATGCTAAGAGGTGCTCAATTTGACAT AGGGGATGATCTGATCAGGAAGGCTCTTTTCATCAGGACTTCAATTTGTGGTGAAGATCATCCAGATACCATATCTGCTC GCGAAACATTAAGCAAAATCACCAGGCTTAATGGAAATGTCCAAAGTCATACTTAGATTTTGAATCTTGTTAGGAAAGTA GAATTATACAAATAGATTTCTAATAAAACTTTTGCAGTCTGTTTCACAGGTCTTTTTACAGTATTTTTTAAAGTCTAATA CAAGATGGCTTCTATTCTTATAAATTTCCGTCTCGGGTAATCTATTACATTTATGCCACCATGGTATTGGGATTTTAGTC ATTTTATATTAGCATGAGCG
CDS sequence (LotjaGi2g1v0434600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATTCAAGAAGATAGCTCCATGTTTGGGTCTTCGACAGCCATGACCAAAAGGAATGCGTCTTCATCATCTTCAAC TTTTTTTTCAGCAAATCAGTCACCATTCTTTTCTCCAAGATCACCAGCACTTCATTTACTAGAGTCAACCAGACCTGATG CTTCAAGTAATAGAATCCAATCAAATTTGGCTCTCCCAAGCACCAGTTCAGGGATTCCAGTACCGCAGTCTCTAGTAAAC ATTAGAAGTAGCTTCGCAAATGCATCTGCATCTTCCTCAATTGACATCTCTAGCAGCAGCATATCCGGTCACCGCCACCG ACATTATGATGATTATTCTGGACAAAAAGAGAAGCAAATGAAAACAGAAAGAAATCAAAGAACATCATCAACCACAGGTT CCACATCACTTTCTTCTTATAGACTGAGGAATTGTGATGTTTTCATAGGATTCCATGGTGGGAAGACTCCTTTACTTCGA TTTGTTAACTGGCTCCGCGCTGAGTTAGAAATTCAAGGAATCAGTTGCTTTGTATCGGACAGGGCTCGATGTAGGAAGTC TCGCAAACTTGGCATGGTGGAGAGAGCCATGGATGCTGCTTCTTTTGGGATAGTAATCATTACAAGGAAGTCTTTCAAGA ACCCGTACACCATTGAGGAGCTGCAGTTTTTTTCTAGCAAGAAGAATTTGGTCCCTATATACTTTGATTTGAGTCCAGCT GATTGTCTTGTGAGGGATATAATTGAAAAGAGGGGCGAGGTGTGGGAAAAACATGGAGGGGAACTTTGGCTCTCATATGA AGGGATAGAACAGGAGTGGAAAGATGCAGTGCATGGACTCTCTCGGATTGATGAATGGAAGTTGGAAGCAAAGGATGGAA ACTGGAGAGATTGCATACTGAGGGCTGTCACATTATTAGCAACGAGGTCAGGTAAAAGAAGCGTTGCGGAGCGTTTAACA AAATGGAGAGAGAAGGTAGAAAAAGAGGAGTTTCCTTTCACCAGAAATGAGAATTTTATTGGCAGAAAGAAAGAGCTTTC GCAGTTGGAATTTATGTTGTTTGGTGATGTCACAAGAGATGCAGAGCAAGACTATATTGAACTTAAGGCCAGGCCCAAAC AAAAGGATTTAATAATTGGTTCGGGCAAGGGTATTCTGATAGATGAAAGATGGAGAGGAAGACATATGGGAAATGGCAGC AAGAAGGAAAAAGAATCAGTTGTGTGGAAGGAGTTGGAGAAAGAGATTGAAATGCAAGGCATTGAGTTTTCTCATAGGCA CTACCACAAAAGGCTAAAACGTGGAAAGTATACCAAGAAGAAAAGAGGAATGAAGATTTTGTATGGGAAAGGGATTGCTT GTGTTTCAGGGGATTCAGGAATTGGAAAAACTGAACTTATTCTTGAATTTGCTTATAGATTTCATCAGAGATATAAGATG GTTTTGTGGATAGGAGGGGAGAGAAGATACATAAGGCAAAACTATCTTAATATCAGGTCCTTTTTAGAAGTTGACGTGGG AGTTGAGAATACTTTGGAGAAAACTAAGATACGAAGCTTTGAAGAGCAGGAAGCTGCGGCTATTTCCAGAGTTCGAAAAG AACTAATGAGGAACGTTCCATATCTTGTGGTCATTGATAACTTGGAAAGTGAAAATGATTGGTGGGATCGCAAATTTGTG ATGGATCTTCTCCCTCGGTTTGGTGGAGAGACCCATGTAATTATATCAACACGCCTTCCTTCCGTCATGAATTTGGAACC TTTGAAACTTTCATACTTATCTGGAGTGGAAGCAATGTCTTTGATGGTAGGAAGTGGCAAGGACTATCCTGTTGCAGAGA TTGATGCTTTGAGAACTATTGAGGAGAAAGTTGGAAGATTAACTTTGGGCCTTGCAATTGTCAATTCAATTTTGTCTGAA TTACCCATAACCCCAACCAGGCTCCTAGATACCATAAATAGAATGCCTTTGAAGGACATATCATGGAGTGGTAAAGAAGC TCACATGTTAAGGAAGAACACTTTCCTTCTGCAACTTTTTGATGTTTGTTTCTCCATATTTGATCATGCAGATGGCCCGA GGAGCTTGGCCACCAGAATGGTGCTGGCAAGTGGATGGTTTGCACCTGGTGCAATTCCTGTTTCCTTGTTATCACTTGCT GCTCATAAGATACCAGAAAAATGTCACAAAACCTATTTCTGGAGAAGAACAGTGCAATTATTAGCATGCGGGTTCACGTC TTCATACATCCAAAAATCAGAATTGGAAGCGTCTTCTTTGCTGCTAAGGTTTAATATGGCAAGAAGCAGCATGAAGGAAG GCTATATCCATTTCAATGAGCTCATCAAACTATATGCTCAGAAAAGAGAAGGTTCTGTAGCTGCACAAGCAATGACTCAA GCTATAATCAGTCACGGGTCAATATCTGAAAATATGGAGCATTTCTGGGCTGCATGTTTTCTGTTATGTGGATTTGGCCA TGACCCTGTTGTTGTTGAGCTCAAGGTGTCTGAGCTTTTATACCTTGTCAAGAAAGTTGTTCTGCCCCTTGCAATTCACA CATTCATTACTTTTTCTCGATGCACGGCTGCGCTTGAGCTTCTACGCTTGTGCACCAATGCCTTGGAAGCTGCGGATCAA GCATTCGTTACCCCGGTTGATAAGTGGTTCGACAAAACACTTTGCTGGAGGTCCATCAAGACTAATGCCGAGTTGAATCC TTGCCTTTGGCAAGAGTTAGCTCTGTGTAGAGCCACTGTTCTTGAGACTAGGGCCAAGCTAATGCTAAGAGGTGCTCAAT TTGACATAGGGGATGATCTGATCAGGAAGGCTCTTTTCATCAGGACTTCAATTTGTGGTGAAGATCATCCAGATACCATA TCTGCTCGCGAAACATTAAGCAAAATCACCAGGCTTAATGGAAATGTCCAAAGTCATACTTAG
Protein sequence (LotjaGi2g1v0434600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDIQEDSSMFGSSTAMTKRNASSSSSTFFSANQSPFFSPRSPALHLLESTRPDASSNRIQSNLALPSTSSGIPVPQSLVN IRSSFANASASSSIDISSSSISGHRHRHYDDYSGQKEKQMKTERNQRTSSTTGSTSLSSYRLRNCDVFIGFHGGKTPLLR FVNWLRAELEIQGISCFVSDRARCRKSRKLGMVERAMDAASFGIVIITRKSFKNPYTIEELQFFSSKKNLVPIYFDLSPA DCLVRDIIEKRGEVWEKHGGELWLSYEGIEQEWKDAVHGLSRIDEWKLEAKDGNWRDCILRAVTLLATRSGKRSVAERLT KWREKVEKEEFPFTRNENFIGRKKELSQLEFMLFGDVTRDAEQDYIELKARPKQKDLIIGSGKGILIDERWRGRHMGNGS KKEKESVVWKELEKEIEMQGIEFSHRHYHKRLKRGKYTKKKRGMKILYGKGIACVSGDSGIGKTELILEFAYRFHQRYKM VLWIGGERRYIRQNYLNIRSFLEVDVGVENTLEKTKIRSFEEQEAAAISRVRKELMRNVPYLVVIDNLESENDWWDRKFV MDLLPRFGGETHVIISTRLPSVMNLEPLKLSYLSGVEAMSLMVGSGKDYPVAEIDALRTIEEKVGRLTLGLAIVNSILSE LPITPTRLLDTINRMPLKDISWSGKEAHMLRKNTFLLQLFDVCFSIFDHADGPRSLATRMVLASGWFAPGAIPVSLLSLA AHKIPEKCHKTYFWRRTVQLLACGFTSSYIQKSELEASSLLLRFNMARSSMKEGYIHFNELIKLYAQKREGSVAAQAMTQ AIISHGSISENMEHFWAACFLLCGFGHDPVVVELKVSELLYLVKKVVLPLAIHTFITFSRCTAALELLRLCTNALEAADQ AFVTPVDKWFDKTLCWRSIKTNAELNPCLWQELALCRATVLETRAKLMLRGAQFDIGDDLIRKALFIRTSICGEDHPDTI SARETLSKITRLNGNVQSHT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 979 | 979 | 0.0 | – | |
| PANTHER | 1 | 979 | 979 | 0.0 | – | |
| MobiDBLite | 95 | 136 | 42 | - | – | |
| MobiDBLite | 101 | 124 | 24 | - | – | |
| Gene3D | 139 | 307 | 169 | 3.5E-13 | ||
| SUPERFAMILY | 143 | 241 | 99 | 1.57E-9 | ||
| Pfam | 160 | 239 | 80 | 1.3E-7 | ||
| SUPERFAMILY | 331 | 652 | 322 | 9.55E-13 | ||
| Gene3D | 422 | 586 | 165 | 4.6E-12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi2g1v0434600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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