Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF16901

Source: Pfam

Description

C-terminal domain of alpha-glycerophosphate oxidase

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj5g3v1795750.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.50.50.60 IPR000447 IPR006076 IPR023753 IPR031656 NON_CYTOPLASMIC_DOMAIN PF01266 PF16901 PR01001 PS00977 PS00978 PS51257 PTHR11985 PTHR11985:SF15 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905 SSF54373 TMhelix	21
LotjaGi5g1v0270500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp\|Q9SS48\|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr\|I1LCX0\|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500	Domains G3DSA:1.10.8.870 G3DSA:3.30.9.10 G3DSA:3.50.50.60 IPR000447 IPR006076 IPR031656 IPR036188 IPR038299 NON_CYTOPLASMIC_DOMAIN PF01266 PF16901 PR01001 PS00977 PS00978 PS51257 PTHR11985 PTHR11985:SF26 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905 SSF54373 TMhelix	24
LotjaGi5g1v0270500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp\|Q9SS48\|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr\|I1LCX0\|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.10 G3DSA:3.50.50.60 IPR000447 IPR006076 IPR031656 IPR036188 NON_CYTOPLASMIC_DOMAIN PF01266 PF16901 PR01001 PS00977 PS00978 PS51257 PTHR11985 PTHR11985:SF26 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905 SSF54373 TMhelix TRANSMEMBRANE	24
LotjaGi5g1v0270500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp\|Q9SS48\|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr\|I1LCX0\|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500	Domains G3DSA:1.10.8.870 G3DSA:3.30.9.10 G3DSA:3.50.50.60 IPR000447 IPR006076 IPR031656 IPR036188 IPR038299 NON_CYTOPLASMIC_DOMAIN PF01266 PF16901 PR01001 PS00977 PS00978 PS51257 PTHR11985 PTHR11985:SF26 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905 SSF54373 TMhelix	24
LotjaGi5g1v0270500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp\|Q9SS48\|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr\|I1LCX0\|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500	Domains G3DSA:3.30.9.10 G3DSA:3.50.50.60 IPR000447 IPR006076 IPR031656 IPR036188 NON_CYTOPLASMIC_DOMAIN PF01266 PF16901 PR01001 PS00977 PS00978 PS51257 PTHR11985 PTHR11985:SF26 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905 SSF54373 TMhelix	22
LotjaGi5g1v0270500.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp\|Q9SS48\|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr\|I1LCX0\|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500	Domains G3DSA:1.10.8.870 G3DSA:3.30.9.10 G3DSA:3.50.50.60 IPR000447 IPR006076 IPR031656 IPR036188 IPR038299 NON_CYTOPLASMIC_DOMAIN PF01266 PF16901 PR01001 PS00977 PS00978 PS51257 PTHR11985 PTHR11985:SF26 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905 SSF54373 TMhelix	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TMhelix	TMHMM	1	16.67