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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0270500 |
Transcript ID | LotjaGi5g1v0270500.5 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SS48|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr|I1LCX0|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58376431..58381435) extracted from Lotus japonicus Gifu genome v1.2.
ATGATTCGCCTGAGAAGACTCGGCCCCGCCGTCGGAGCAGCCATCGCCACCGCCTGCGGAGGCGCCGTCATCCTCTACAA TCCTTCCATCTCCGCCAACGACTACGGCGGCGGTTCCCGCCTCGAGAGCCTCCGCCAGAGGGTTTACGACCAGAACGCTG TTGTTCCGTCGAGGGAGACGCAGCAGTCGGCGCTGATGGCTGCTGGTAAAGGTAATCCACTCGATGTTCTTGTTATTGGT GGCGGAGCTACTGGCTCTGGCGCTGCGCTCGATGCCGTGACGCGAGGGCTGCGAGTTGGCCTTGTGGAGCGCGAGGATTT CGCATCCGGAACTTCTTCTCGATCCACGAAGCTTCTTCATGGAGGTGCGTTTGCGTTTATGTAGATCCATTGAAATGTGT TCATCCACGATTTTTTGATTGCAAACTGTGTTGAATTGCCATCGTTTTAGTTTGATGAATTAATGGTTTTATGTTGTTGT TGTGATGCAAAATGCGATAGTGAATGATTTAGTCATACATGCATTGTTTATGATTTGCAAAATTGATTATCAGAACTCTG TTTCTTTTCCTTTTGGATTTCAACTACCTAAAGTGCGTTTGGGAAAATAACTTAATTAAGCGCTTATGGCTATATATAAG TGCTTATTGATAAGATAATTTGAGATATTTATTAAAACAAGTTGAAAATAAGTTAGAAATAAGTATAAGCACTTATTCAT AAGCTATTCTGAATAGTTTGTAGGTAGGTCGTAAGCTATTTCAATAAACTCTCCCAAACACTTGTATAAGAGCTTATGCC ATAAGGTAAGCTCAAATAAGTTCTTACAAACCAGAACCTAGTGAAAAATGAGGTCTTAACGTGAAAGCACTTGCTTTCGC TTTCTTGTTGAGATTAAGAAGCAAATAGGGGTTAAGGACCTGAGGCCTGTGTGCATCTTAACAATGCAGATACTATACTG CCTGAGTTCATTTCTCTTGGGGCAATGGTTTAATAAATTTATATACTGTTTTATTTTTTTATAGTGGATTTTTTTAATGC GATTAAATCTAATATCAGCGTTTTTGTGAACTATCAGGAGTTCGTTACTTGGAGAAAGCTGTGTTTAACCTTGACTATGG GCAATTCAAATTAGTGCTTCATGCGCTTGCTGAGCGTAAACAGGTTATTGACAATGCACCCCACCTATGCCATGCATTGC CATGTATGACACCATGTTTTAACTGGTTTGAAGTACTATACTACTGGGCGGGCTTGAAAATGTACGATTTGGTCGCAGGA AGACAACTGCTGCACTTCTCAAGATATTATTCTACAAAACAGTCTGTTGAGCTCTTTCCCACTCTGGCTAGGGAGGTAAA CAATAGAAGCCTAAGGGGCACAGTTGTTTATTATGATGGGCAGATGAATGATTCACGGCTTAATGTTGGATTAGCTTGCA CTGCTGCTTTAGCTGGTGCAGCAGTGCTGAACCATGCAGAAGTGGTATCCTTACTGAAGGATGATGCTGGAGAACGGATC ATTGGTGTACGAATTCGGGACAATTTGACTGGTAACTAGCATTTTTTTTCTATCTGTTATGAGTTACCTCTGTTTACCCG TCTTTCCAAAAAAAGGCAGGAAATTGGCAAATTGTGAAGGTAGTGTAGAATAATATTTCTGACTAGTCCAAAGATACGTA TGCATCATATGTAATTCACACAATCTGAAGCTTCATTCTTCTATATTGGATTTTTAAATTAAACCACATAATCTGAAGCA TCATTCTCCCATAAATGAACAAACATATCCGCCGCTGGAATAGAGCTATTGGACTTGGGTAAAATCAAATTCAGAACTTT ATTGTTTTGCATTGTGGAAATAGTTTTAAAAAGGTTGGTAAAATAAATACAGCCCATTCATGAATACGCATTACAGACGG GGAAGCACATCTTAGTTTGTGAAATTTAAAAGTCACAATCAAATATTTATTATTTAAACTTTGATAGTTAACTACATATC TTCACTATTTTATGTGCTGCAGGCAAAGAGTTCGATACATATGCAAAAGTAATTTTGAATGCAAGTGGCCCATTTTGCGA CTCTATTAGGAAAATGGCCAACAAAAATTCACAAGAAATGATTGCTCCTAGCAGTGGCGTACATATTATACTTCCTGATT ATTATTCTCCGGAGGGAATGGGCTTAATTGTTCCTAAAACTAAGGATGGGCGTGTTGTTTTCATGCTGCCGTGGCTGGGA CGTACTGTTGCTGGAACTACAGATTCTAGTACTGCCATTACTTATCTTCCAGAACCGCATGAAGATGAGATTCAATTTAT ATTGGATGCGATATCTGATTACCTTAATGTTAAAGTATGCTATACTTCCAGACATAGATAACTTTTTAACTTATTATCGT ATTTTCTAAAGAATTAGTATGGGTAGAACACTAGAACATAATGATTCAATCCATGCAGCTATTTCTACCTAGTTTTTTTT TATGTTAGGTTCAGAATAAAAAGTTCTCACAGATATTGCTTGTCTGGAAATATGTTGGATTATCTTAGCAAAAAGAAAAA AAGAATGCATGAATGAAAGAAAGTATTTTGCATCATATATTTGTTGGTTTAATAATTCAATTTTATCATTGTGGAAGCCC CTGCTTCCACTTCTACTTTAATTAGCTGGGCATGTCCTTGTAATTCATGCTTAAATGCAAACCCAATGATGCTACTGAGG AGCCACTCAGTCTAGATGCCTTTTTTTTTTCTTCTATTCTTAATTGCCTTTTCATTGTACTCTGTTTGCTAATGAGGAAT AAATAATGGTACCAAATTTTAGGTACGTCGCACTGATGTTCTTTCTGCTTGGAGTGGTATTCGCCCATTAGCAGTGGATC CAACAGCGAAAAATACTGAGAGCATCTCGAGGGATCATGTTGTCTGTGAGGATTACCCTGGTTTGGTCACCATCACTGGT GGCAAGTGGACTACCTATCGCAGGTAATGTTTTAATAGGATGCTGAAATTTCAGTGTTAAAATTTCTTCAGATGTTGTTT CACTAACTAGGCATATCATGTTGATTGTCCAGTTACTCTATTTAATGAGTAACATTCAATTATTTTCTAACATCTACTTT TAGTCATTGTTTCCTTTCCTTCTCATCGGCACTCCAGCACACTAAGGATATTATTTTGACTTCTGTGTTTCAGCATGGCA GAAGATGCTGTTAATGCAGCTATTAAGTCTGGAAAGCTGACCCCCACCATTGGATGTGTGACAAAAAATCTGGCCATTGT TGGTGGTGAAGGGTGGGAACCTTCTTCATTTACAGTTCTTGCTCAACAGTATAAGCGCATGAAAACTACACATGGTAAAG TTGTTCCTGGGGCAATGGACACTGCTGCTGCAAAGCACTTGTCTCAGGCATATGGAACATTGGCTGAGCGTGTGGCCGCC ATTGCTCAGGTTTGCTTGTATTACTCCATATTTCGTGTTACATGCATTGCACAACAACGTACACAAATGCACCTTAATAT TATCTTGACTGGATAATTTTGTACAATTCGTGGTTTGGTGTTATGTTAACAACTTCTCAGGTACTACTTGGGCGTTCAAT TTAAATAAAAACAAGTGCTCTGCTTTGTATTTTTCTTTCCATGTTTATTTTTAATGTTTAATACCTATGGTCTGCATAAT TTTGTTTAGAACTAGCATAGTGCTTTTCTGAATCAGTTGAGTTTTTATGCATTATAAAAAATTCAAACGATTAAGCTAGA GTTTGCTTGAATGACACCATTTACACTTTTTAAGGGTGTGAGATTATGATCAAAATCGAAAATACTCTTTTATGCGACTG AATTTCTTAATTATGTATCAAAACAGACATTGGAACATGAATATGAACTTGGAGGAGTGGTTTGGGTGTTACTTGTAATA GAAAAATATCACAGAAGCTTAACTGCCTAAGGTAAAATTTTACTTTATAGTTATAAGACCTACAGAACTGTACGGGATTG AGTGCTCAGTGGTGAAGAGATAGTAAGAATATAAGTTCAATACTGCAAAGATGAAAGTGTTAAGATGGAATGGAACAAAC AAGACAGTATAGAATTATGAATGAATGCATTACTGAGAAAGTCAGGTTACATCTATCATGGAAAAGATGGTAGAATCTCA CCTTTGTCTTAGCCTCTAGGTGGTTTAGACATGCATGGAAAATGCTTATAGATGCCCCAAGAGGGATAGTTGATCAGATG AAGGGTAGTCTACCAACTAAAGATAGAGCAAATCCATAGGCTAAATCACTATAGTATTGTTGGATCCATGTTGCCAAGCC ACCTTATAGGAACAAGCTTTTGTTGTTGTAGGTTAAAGGGCTTCTTATTCACAGTTTGTTTGGTGGTTGATGAGATATGT GAAAATAACTAGAAATGGGATTCAATTTTATAGTTTGATTGTATATTGGTGGTTGTTAATAAATGATCTTATGTGACAAA ATGTGTCTATTTATTTAAATTCTCTTGCATTTTTTTGTGAGTGGTTGGTGGGAGGTCTTGCCGTCTTGGTGGTGATTGTT ATTGCAATATGCTCTTTGTAATATGGTGATAATATTTCTCCCTTATCGTGCTTCATTCATGTTATAGGAGTTGTAGTCGG TACTAAGTTTCATTTAATTGTATCATGATGGTCCGAGTTAAACTGATTCTATGTTTGTATTTTAGAATGAAAATTTGGGG AAGCGACTTGCCCATGGTTACCCATATCTGGAGGCAGAGGTAGCTTACTGTGCTCGGAATGAATATTGTGAATCTGCTAT TGACTTCATTGCAAGGAGGACTCGTCTGGCGTTCCTCGAAACCGATGCAGCAAGAAGGGCATTGCCTCGGGTCATTGAAA TATTGTCAACTGAGCACAAATGGGACAAATCAAGGCAGAAGGAAGAGTTGCAGAAGGCTACAGAATTTTTACAGACTTTT AAATCCTCAAAAAATGCTCAGTTTCATGATGGGAAACACAAATAG
CDS sequence (LotjaGi5g1v0270500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCGCCTGAGAAGACTCGGCCCCGCCGTCGGAGCAGCCATCGCCACCGCCTGCGGAGGCGCCGTCATCCTCTACAA TCCTTCCATCTCCGCCAACGACTACGGCGGCGGTTCCCGCCTCGAGAGCCTCCGCCAGAGGGTTTACGACCAGAACGCTG TTGTTCCGTCGAGGGAGACGCAGCAGTCGGCGCTGATGGCTGCTGGTAAAGGTAATCCACTCGATGTTCTTGTTATTGGT GGCGGAGCTACTGGCTCTGGCGCTGCGCTCGATGCCGTGACGCGAGGGCTGCGAGTTGGCCTTGTGGAGCGCGAGGATTT CGCATCCGGAACTTCTTCTCGATCCACGAAGCTTCTTCATGGAGGAGTTCGTTACTTGGAGAAAGCTGTGTTTAACCTTG ACTATGGGCAATTCAAATTAGTGCTTCATGCGCTTGCTGAGCGTAAACAGGTTATTGACAATGCACCCCACCTATGCCAT GCATTGCCATGTATGACACCATGTTTTAACTGGTTTGAAGTACTATACTACTGGGCGGGCTTGAAAATGTACGATTTGGT CGCAGGAAGACAACTGCTGCACTTCTCAAGATATTATTCTACAAAACAGTCTGTTGAGCTCTTTCCCACTCTGGCTAGGG AGGTAAACAATAGAAGCCTAAGGGGCACAGTTGTTTATTATGATGGGCAGATGAATGATTCACGGCTTAATGTTGGATTA GCTTGCACTGCTGCTTTAGCTGGTGCAGCAGTGCTGAACCATGCAGAAGTGGTATCCTTACTGAAGGATGATGCTGGAGA ACGGATCATTGGTGTACGAATTCGGGACAATTTGACTGGCAAAGAGTTCGATACATATGCAAAAGTAATTTTGAATGCAA GTGGCCCATTTTGCGACTCTATTAGGAAAATGGCCAACAAAAATTCACAAGAAATGATTGCTCCTAGCAGTGGCGTACAT ATTATACTTCCTGATTATTATTCTCCGGAGGGAATGGGCTTAATTGTTCCTAAAACTAAGGATGGGCGTGTTGTTTTCAT GCTGCCGTGGCTGGGACGTACTGTTGCTGGAACTACAGATTCTAGTACTGCCATTACTTATCTTCCAGAACCGCATGAAG ATGAGATTCAATTTATATTGGATGCGATATCTGATTACCTTAATGTTAAAGTACGTCGCACTGATGTTCTTTCTGCTTGG AGTGGTATTCGCCCATTAGCAGTGGATCCAACAGCGAAAAATACTGAGAGCATCTCGAGGGATCATGTTGTCTGTGAGGA TTACCCTGGTTTGGTCACCATCACTGGTGGCAAGTGGACTACCTATCGCAGCATGGCAGAAGATGCTGTTAATGCAGCTA TTAAGTCTGGAAAGCTGACCCCCACCATTGGATGTGTGACAAAAAATCTGGCCATTGTTGGTGGTGAAGGGTGGGAACCT TCTTCATTTACAGTTCTTGCTCAACAGTATAAGCGCATGAAAACTACACATGGTAAAGTTGTTCCTGGGGCAATGGACAC TGCTGCTGCAAAGCACTTGTCTCAGGCATATGGAACATTGGCTGAGCGTGTGGCCGCCATTGCTCAGAATGAAAATTTGG GGAAGCGACTTGCCCATGGTTACCCATATCTGGAGGCAGAGGTAGCTTACTGTGCTCGGAATGAATATTGTGAATCTGCT ATTGACTTCATTGCAAGGAGGACTCGTCTGGCGTTCCTCGAAACCGATGCAGCAAGAAGGGCATTGCCTCGGGTCATTGA AATATTGTCAACTGAGCACAAATGGGACAAATCAAGGCAGAAGGAAGAGTTGCAGAAGGCTACAGAATTTTTACAGACTT TTAAATCCTCAAAAAATGCTCAGTTTCATGATGGGAAACACAAATAG
Protein sequence (LotjaGi5g1v0270500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIRLRRLGPAVGAAIATACGGAVILYNPSISANDYGGGSRLESLRQRVYDQNAVVPSRETQQSALMAAGKGNPLDVLVIG GGATGSGAALDAVTRGLRVGLVEREDFASGTSSRSTKLLHGGVRYLEKAVFNLDYGQFKLVLHALAERKQVIDNAPHLCH ALPCMTPCFNWFEVLYYWAGLKMYDLVAGRQLLHFSRYYSTKQSVELFPTLAREVNNRSLRGTVVYYDGQMNDSRLNVGL ACTAALAGAAVLNHAEVVSLLKDDAGERIIGVRIRDNLTGKEFDTYAKVILNASGPFCDSIRKMANKNSQEMIAPSSGVH IILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSSTAITYLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAW SGIRPLAVDPTAKNTESISRDHVVCEDYPGLVTITGGKWTTYRSMAEDAVNAAIKSGKLTPTIGCVTKNLAIVGGEGWEP SSFTVLAQQYKRMKTTHGKVVPGAMDTAAAKHLSQAYGTLAERVAAIAQNENLGKRLAHGYPYLEAEVAYCARNEYCESA IDFIARRTRLAFLETDAARRALPRVIEILSTEHKWDKSRQKEELQKATEFLQTFKSSKNAQFHDGKHK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 627 | 627 | 0.0 | – | |
Phobius | 1 | 20 | 20 | - | – | |
ProSiteProfiles | 1 | 19 | 19 | 7.0 | – | |
Phobius | 1 | 6 | 6 | - | – | |
PANTHER | 1 | 627 | 627 | 0.0 | ||
Phobius | 7 | 15 | 9 | - | – | |
TMHMM | 7 | 26 | 20 | - | – | |
Phobius | 16 | 20 | 5 | - | – | |
Phobius | 21 | 628 | 608 | - | – | |
SUPERFAMILY | 74 | 339 | 266 | 2.16E-36 | ||
PRINTS | 74 | 86 | 13 | 6.6E-32 | ||
Gene3D | 75 | 450 | 376 | 2.1E-129 | ||
Pfam | 75 | 443 | 369 | 1.6E-49 | ||
ProSitePatterns | 79 | 96 | 18 | - | ||
PRINTS | 87 | 97 | 11 | 6.6E-32 | ||
PRINTS | 103 | 115 | 13 | 6.6E-32 | ||
PRINTS | 155 | 167 | 13 | 6.6E-32 | ||
Gene3D | 159 | 407 | 249 | 2.1E-129 | – | |
SUPERFAMILY | 314 | 406 | 93 | 6.67E-6 | – | |
PRINTS | 400 | 406 | 7 | 6.6E-32 | ||
PRINTS | 431 | 443 | 13 | 6.6E-32 | ||
ProSitePatterns | 436 | 446 | 11 | - | – | |
Pfam | 465 | 599 | 135 | 3.4E-39 | ||
Gene3D | 491 | 627 | 137 | 2.2E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Glycerol-3-phosphate dehydrogenase (quinone) activity | Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol. | ||
Biological process | Glycerol-3-phosphate metabolic process | The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol. | ||
Cellular component | Glycerol-3-phosphate dehydrogenase complex | An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate. | ||
Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0270500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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