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IPR006076

Source: InterPro

Description

IPR006076 is a FAD dependent oxidoreductase.

<p>This entry includes various FAD dependent oxidoreductases: glycerol-3-phosphate dehydrogenase ([ec:1.1.99.5]), sarcosine oxidase beta subunit ([ec:1.5.3.1]), D-amino acid dehydrogenase ([ec:1.4.99.1]), D-aspartate oxidase ([ec:1.4.3.1]). <p>D-amino acid oxidase ([ec:1.4.3.3]) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase ([ec:1.4.3.1]) (DASOX) [[cite:PUB00002712]] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [[cite:PUB00002345]] to be important for the enzyme's catalytic activity.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Associated Lotus transcripts 21

Transcript Name Description Predicted domains Domain count
Lj0g3v0236509.1
– FAD-dependent oxidoreductase family protein [Theobroma cacao] gi|508699655|gb|EOX91551.1|
Domains
7
Lj0g3v0267429.3
– PREDICTED: squalene monooxygenase-like [Glycine max] gi|356569981|ref|XP_003553171.1|
Domains
17
Lj1g3v1989420.1
– Sarcosine oxidase [Medicago truncatula] gi|357466531|ref|XP_003603550.1|
Domains
9
Lj1g3v3597200.1
– PREDICTED: D-amino acid dehydrogenase small subunit-like [Cicer arietinum] gi|502103233|ref|XP_004492233.1|
Domains
9
Lj4g3v0806630.1
– FAD-dependent oxidoreductase family protein [Theobroma cacao] gi|508699655|gb|EOX91551.1|
Domains
7
Lj5g3v0409270.1
– PREDICTED: l-2-hydroxyglutarate dehydrogenase, mitochondrial-like [Cicer arietinum] gi|502091773|ref|XP_004489631.1|
Domains
7
Lj5g3v1795750.1
–
Domains
21
Lj6g3v1088790.1
– FAD-dependent oxidoreductase family protein [Theobroma cacao] gi|508782371|gb|EOY29627.1|
Domains
6
Lj6g3v1088790.2
– FAD-dependent oxidoreductase family protein [Theobroma cacao] gi|508782371|gb|EOY29627.1|
Domains
11
LotjaGi1g1v0395400.1
– N-methyl-L-tryptophan oxidase; TAIR: AT2G24580.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SJA7|SOX_ARATH Probable sarcosine oxidase; TrEMBL-Plants: tr|G7J2T2|G7J2T2_MEDTR Monomeric form sarcosine oxidase; Found in the gene: LotjaGi1g1v0395400
Domains
9
LotjaGi1g1v0595800.1
– D-amino acid dehydrogenase; TAIR: AT5G48440.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q98F08|DADA1_RHILO D-amino acid dehydrogenase 1; TrEMBL-Plants: tr|G7KWY6|G7KWY6_MEDTR FAD-dependent oxidoreductase; Found in the gene: LotjaGi1g1v0595800
Domains
9
LotjaGi4g1v0100400.1
– D-amino acid dehydrogenase; TAIR: AT5G67290.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q10058|YAM3_SCHPO Putative oxidoreductase C1F5.03c; TrEMBL-Plants: tr|A0A1J7FNB5|A0A1J7FNB5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0100400
Domains
8
LotjaGi4g1v0100500.1
– D-amino acid dehydrogenase; TAIR: AT5G67290.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q10058|YAM3_SCHPO Putative oxidoreductase C1F5.03c; TrEMBL-Plants: tr|A0A0L9TP55|A0A0L9TP55_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0100500
Domains
8
LotjaGi5g1v0044600.1
– Dehydrogenase-like protein; TAIR: AT3G56840.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9LES4|L2HDH_ARATH L-2-hydroxyglutarate dehydrogenase, mitochondrial; TrEMBL-Plants: tr|I3S380|I3S380_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0044600
Domains
8
LotjaGi5g1v0270500.1
– Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SS48|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr|I1LCX0|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500
Domains
24
LotjaGi5g1v0270500.2
– Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SS48|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr|I1LCX0|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500
Domains
24
LotjaGi5g1v0270500.3
– Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SS48|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr|I1LCX0|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500
Domains
24
LotjaGi5g1v0270500.4
– Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SS48|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr|I1LCX0|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500
Domains
22
LotjaGi5g1v0270500.5
– Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SS48|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr|I1LCX0|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500
Domains
24
LotjaGi6g1v0207000.1
– FAD-dependent oxidoreductase family protein; TAIR: AT2G22650.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q04VP5|MNMC_LEPBJ tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; TrEMBL-Plants: tr|A0A0R0GF99|A0A0R0GF99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0207000
Domains
8
LotjaGi6g1v0207000.2
– FAD-dependent oxidoreductase family protein; TAIR: AT2G22650.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|O32159|YURR_BACSU Uncharacterized oxidoreductase YurR; TrEMBL-Plants: tr|K7MCN6|K7MCN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0207000
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 4.76