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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0270500 |
| Transcript ID | LotjaGi5g1v0270500.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate dehydrogenase; TAIR: AT3G10370.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SS48|SDP6_ARATH Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; TrEMBL-Plants: tr|I1LCX0|I1LCX0_SOYBN Glycerol-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0270500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58376422..58381435) extracted from Lotus japonicus Gifu genome v1.2.
CTCACCGCCATGATTCGCCTGAGAAGACTCGGCCCCGCCGTCGGAGCAGCCATCGCCACCGCCTGCGGAGGCGCCGTCAT CCTCTACAATCCTTCCATCTCCGCCAACGACTACGGCGGCGGTTCCCGCCTCGAGAGCCTCCGCCAGAGGGTTTACGACC AGAACGCTGTTGTTCCGTCGAGGGAGACGCAGCAGTCGGCGCTGATGGCTGCTGGTAAAGGTAATCCACTCGATGTTCTT GTTATTGGTGGCGGAGCTACTGGCTCTGGCGCTGCGCTCGATGCCGTGACGCGAGGGCTGCGAGTTGGCCTTGTGGAGCG CGAGGATTTCGCATCCGGAACTTCTTCTCGATCCACGAAGCTTCTTCATGGAGGTGCGTTTGCGTTTATGTAGATCCATT GAAATGTGTTCATCCACGATTTTTTGATTGCAAACTGTGTTGAATTGCCATCGTTTTAGTTTGATGAATTAATGGTTTTA TGTTGTTGTTGTGATGCAAAATGCGATAGTGAATGATTTAGTCATACATGCATTGTTTATGATTTGCAAAATTGATTATC AGAACTCTGTTTCTTTTCCTTTTGGATTTCAACTACCTAAAGTGCGTTTGGGAAAATAACTTAATTAAGCGCTTATGGCT ATATATAAGTGCTTATTGATAAGATAATTTGAGATATTTATTAAAACAAGTTGAAAATAAGTTAGAAATAAGTATAAGCA CTTATTCATAAGCTATTCTGAATAGTTTGTAGGTAGGTCGTAAGCTATTTCAATAAACTCTCCCAAACACTTGTATAAGA GCTTATGCCATAAGGTAAGCTCAAATAAGTTCTTACAAACCAGAACCTAGTGAAAAATGAGGTCTTAACGTGAAAGCACT TGCTTTCGCTTTCTTGTTGAGATTAAGAAGCAAATAGGGGTTAAGGACCTGAGGCCTGTGTGCATCTTAACAATGCAGAT ACTATACTGCCTGAGTTCATTTCTCTTGGGGCAATGGTTTAATAAATTTATATACTGTTTTATTTTTTTATAGTGGATTT TTTTAATGCGATTAAATCTAATATCAGCGTTTTTGTGAACTATCAGGAGTTCGTTACTTGGAGAAAGCTGTGTTTAACCT TGACTATGGGCAATTCAAATTAGTGCTTCATGCGCTTGCTGAGCGTAAACAGGTTATTGACAATGCACCCCACCTATGCC ATGCATTGCCATGTATGACACCATGTTTTAACTGGTTTGAAGTACTATACTACTGGGCGGGCTTGAAAATGTACGATTTG GTCGCAGGAAGACAACTGCTGCACTTCTCAAGATATTATTCTACAAAACAGTCTGTTGAGCTCTTTCCCACTCTGGCTAG GGAGGTAAACAATAGAAGCCTAAGGGGCACAGTTGTTTATTATGATGGGCAGATGAATGATTCACGGCTTAATGTTGGAT TAGCTTGCACTGCTGCTTTAGCTGGTGCAGCAGTGCTGAACCATGCAGAAGTGGTATCCTTACTGAAGGATGATGCTGGA GAACGGATCATTGGTGTACGAATTCGGGACAATTTGACTGGTAACTAGCATTTTTTTTCTATCTGTTATGAGTTACCTCT GTTTACCCGTCTTTCCAAAAAAAGGCAGGAAATTGGCAAATTGTGAAGGTAGTGTAGAATAATATTTCTGACTAGTCCAA AGATACGTATGCATCATATGTAATTCACACAATCTGAAGCTTCATTCTTCTATATTGGATTTTTAAATTAAACCACATAA TCTGAAGCATCATTCTCCCATAAATGAACAAACATATCCGCCGCTGGAATAGAGCTATTGGACTTGGGTAAAATCAAATT CAGAACTTTATTGTTTTGCATTGTGGAAATAGTTTTAAAAAGGTTGGTAAAATAAATACAGCCCATTCATGAATACGCAT TACAGACGGGGAAGCACATCTTAGTTTGTGAAATTTAAAAGTCACAATCAAATATTTATTATTTAAACTTTGATAGTTAA CTACATATCTTCACTATTTTATGTGCTGCAGGCAAAGAGTTCGATACATATGCAAAAGTAATTTTGAATGCAAGTGGCCC ATTTTGCGACTCTATTAGGAAAATGGCCAACAAAAATTCACAAGAAATGATTGCTCCTAGCAGTGGCGTACATATTATAC TTCCTGATTATTATTCTCCGGAGGGAATGGGCTTAATTGTTCCTAAAACTAAGGATGGGCGTGTTGTTTTCATGCTGCCG TGGCTGGGACGTACTGTTGCTGGAACTACAGATTCTAGTACTGCCATTACTTATCTTCCAGAACCGCATGAAGATGAGAT TCAATTTATATTGGATGCGATATCTGATTACCTTAATGTTAAAGTATGCTATACTTCCAGACATAGATAACTTTTTAACT TATTATCGTATTTTCTAAAGAATTAGTATGGGTAGAACACTAGAACATAATGATTCAATCCATGCAGCTATTTCTACCTA GTTTTTTTTTATGTTAGGTTCAGAATAAAAAGTTCTCACAGATATTGCTTGTCTGGAAATATGTTGGATTATCTTAGCAA AAAGAAAAAAAGAATGCATGAATGAAAGAAAGTATTTTGCATCATATATTTGTTGGTTTAATAATTCAATTTTATCATTG TGGAAGCCCCTGCTTCCACTTCTACTTTAATTAGCTGGGCATGTCCTTGTAATTCATGCTTAAATGCAAACCCAATGATG CTACTGAGGAGCCACTCAGTCTAGATGCCTTTTTTTTTTCTTCTATTCTTAATTGCCTTTTCATTGTACTCTGTTTGCTA ATGAGGAATAAATAATGGTACCAAATTTTAGGTACGTCGCACTGATGTTCTTTCTGCTTGGAGTGGTATTCGCCCATTAG CAGTGGATCCAACAGCGAAAAATACTGAGAGCATCTCGAGGGATCATGTTGTCTGTGAGGATTACCCTGGTTTGGTCACC ATCACTGGTGGCAAGTGGACTACCTATCGCAGGTAATGTTTTAATAGGATGCTGAAATTTCAGTGTTAAAATTTCTTCAG ATGTTGTTTCACTAACTAGGCATATCATGTTGATTGTCCAGTTACTCTATTTAATGAGTAACATTCAATTATTTTCTAAC ATCTACTTTTAGTCATTGTTTCCTTTCCTTCTCATCGGCACTCCAGCACACTAAGGATATTATTTTGACTTCTGTGTTTC AGCATGGCAGAAGATGCTGTTAATGCAGCTATTAAGTCTGGAAAGCTGACCCCCACCATTGGATGTGTGACAAAAAATCT GGCCATTGTTGGTGGTGAAGGGTGGGAACCTTCTTCATTTACAGTTCTTGCTCAACAGTATAAGCGCATGAAAACTACAC ATGGTAAAGTTGTTCCTGGGGCAATGGACACTGCTGCTGCAAAGCACTTGTCTCAGGCATATGGAACATTGGCTGAGCGT GTGGCCGCCATTGCTCAGGTTTGCTTGTATTACTCCATATTTCGTGTTACATGCATTGCACAACAACGTACACAAATGCA CCTTAATATTATCTTGACTGGATAATTTTGTACAATTCGTGGTTTGGTGTTATGTTAACAACTTCTCAGGTACTACTTGG GCGTTCAATTTAAATAAAAACAAGTGCTCTGCTTTGTATTTTTCTTTCCATGTTTATTTTTAATGTTTAATACCTATGGT CTGCATAATTTTGTTTAGAACTAGCATAGTGCTTTTCTGAATCAGTTGAGTTTTTATGCATTATAAAAAATTCAAACGAT TAAGCTAGAGTTTGCTTGAATGACACCATTTACACTTTTTAAGGGTGTGAGATTATGATCAAAATCGAAAATACTCTTTT ATGCGACTGAATTTCTTAATTATGTATCAAAACAGACATTGGAACATGAATATGAACTTGGAGGAGTGGTTTGGGTGTTA CTTGTAATAGAAAAATATCACAGAAGCTTAACTGCCTAAGGTAAAATTTTACTTTATAGTTATAAGACCTACAGAACTGT ACGGGATTGAGTGCTCAGTGGTGAAGAGATAGTAAGAATATAAGTTCAATACTGCAAAGATGAAAGTGTTAAGATGGAAT GGAACAAACAAGACAGTATAGAATTATGAATGAATGCATTACTGAGAAAGTCAGGTTACATCTATCATGGAAAAGATGGT AGAATCTCACCTTTGTCTTAGCCTCTAGGTGGTTTAGACATGCATGGAAAATGCTTATAGATGCCCCAAGAGGGATAGTT GATCAGATGAAGGGTAGTCTACCAACTAAAGATAGAGCAAATCCATAGGCTAAATCACTATAGTATTGTTGGATCCATGT TGCCAAGCCACCTTATAGGAACAAGCTTTTGTTGTTGTAGGTTAAAGGGCTTCTTATTCACAGTTTGTTTGGTGGTTGAT GAGATATGTGAAAATAACTAGAAATGGGATTCAATTTTATAGTTTGATTGTATATTGGTGGTTGTTAATAAATGATCTTA TGTGACAAAATGTGTCTATTTATTTAAATTCTCTTGCATTTTTTTGTGAGTGGTTGGTGGGAGGTCTTGCCGTCTTGGTG GTGATTGTTATTGCAATATGCTCTTTGTAATATGGTGATAATATTTCTCCCTTATCGTGCTTCATTCATGTTATAGGAGT TGTAGTCGGTACTAAGTTTCATTTAATTGTATCATGATGGTCCGAGTTAAACTGATTCTATGTTTGTATTTTAGAATGAA AATTTGGGGAAGCGACTTGCCCATGGTTACCCATATCTGGAGGCAGAGGTAGCTTACTGTGCTCGGAATGAATATTGTGA ATCTGCTATTGACTTCATTGCAAGGAGGACTCGTCTGGCGTTCCTCGAAACCGATGCAGCAAGAAGGGCATTGCCTCGGG TCATTGAAATATTGTCAACTGAGCACAAATGGGACAAATCAAGGCAGAAGGAAGAGTTGCAGAAGGCTACAGAATTTTTA CAGACTTTTAAATCCTCAAAAAATGCTCAGTTTCATGATGGGAAACACAAATAG
CDS sequence (LotjaGi5g1v0270500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCGCCTGAGAAGACTCGGCCCCGCCGTCGGAGCAGCCATCGCCACCGCCTGCGGAGGCGCCGTCATCCTCTACAA TCCTTCCATCTCCGCCAACGACTACGGCGGCGGTTCCCGCCTCGAGAGCCTCCGCCAGAGGGTTTACGACCAGAACGCTG TTGTTCCGTCGAGGGAGACGCAGCAGTCGGCGCTGATGGCTGCTGGTAAAGGTAATCCACTCGATGTTCTTGTTATTGGT GGCGGAGCTACTGGCTCTGGCGCTGCGCTCGATGCCGTGACGCGAGGGCTGCGAGTTGGCCTTGTGGAGCGCGAGGATTT CGCATCCGGAACTTCTTCTCGATCCACGAAGCTTCTTCATGGAGGAGTTCGTTACTTGGAGAAAGCTGTGTTTAACCTTG ACTATGGGCAATTCAAATTAGTGCTTCATGCGCTTGCTGAGCGTAAACAGGTTATTGACAATGCACCCCACCTATGCCAT GCATTGCCATGTATGACACCATGTTTTAACTGGTTTGAAGTACTATACTACTGGGCGGGCTTGAAAATGTACGATTTGGT CGCAGGAAGACAACTGCTGCACTTCTCAAGATATTATTCTACAAAACAGTCTGTTGAGCTCTTTCCCACTCTGGCTAGGG AGGTAAACAATAGAAGCCTAAGGGGCACAGTTGTTTATTATGATGGGCAGATGAATGATTCACGGCTTAATGTTGGATTA GCTTGCACTGCTGCTTTAGCTGGTGCAGCAGTGCTGAACCATGCAGAAGTGGTATCCTTACTGAAGGATGATGCTGGAGA ACGGATCATTGGTGTACGAATTCGGGACAATTTGACTGGCAAAGAGTTCGATACATATGCAAAAGTAATTTTGAATGCAA GTGGCCCATTTTGCGACTCTATTAGGAAAATGGCCAACAAAAATTCACAAGAAATGATTGCTCCTAGCAGTGGCGTACAT ATTATACTTCCTGATTATTATTCTCCGGAGGGAATGGGCTTAATTGTTCCTAAAACTAAGGATGGGCGTGTTGTTTTCAT GCTGCCGTGGCTGGGACGTACTGTTGCTGGAACTACAGATTCTAGTACTGCCATTACTTATCTTCCAGAACCGCATGAAG ATGAGATTCAATTTATATTGGATGCGATATCTGATTACCTTAATGTTAAAGTACGTCGCACTGATGTTCTTTCTGCTTGG AGTGGTATTCGCCCATTAGCAGTGGATCCAACAGCGAAAAATACTGAGAGCATCTCGAGGGATCATGTTGTCTGTGAGGA TTACCCTGGTTTGGTCACCATCACTGGTGGCAAGTGGACTACCTATCGCAGCATGGCAGAAGATGCTGTTAATGCAGCTA TTAAGTCTGGAAAGCTGACCCCCACCATTGGATGTGTGACAAAAAATCTGGCCATTGTTGGTGGTGAAGGGTGGGAACCT TCTTCATTTACAGTTCTTGCTCAACAGTATAAGCGCATGAAAACTACACATGGTAAAGTTGTTCCTGGGGCAATGGACAC TGCTGCTGCAAAGCACTTGTCTCAGGCATATGGAACATTGGCTGAGCGTGTGGCCGCCATTGCTCAGGTGTCTATTTATT TAAATTCTCTTGCATTTTTTTGTGAGTGGTTGGTGGGAGGTCTTGCCGTCTTGGTGGTGATTGTTATTGCAATATGCTCT TTGTAA
Protein sequence (LotjaGi5g1v0270500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIRLRRLGPAVGAAIATACGGAVILYNPSISANDYGGGSRLESLRQRVYDQNAVVPSRETQQSALMAAGKGNPLDVLVIG GGATGSGAALDAVTRGLRVGLVEREDFASGTSSRSTKLLHGGVRYLEKAVFNLDYGQFKLVLHALAERKQVIDNAPHLCH ALPCMTPCFNWFEVLYYWAGLKMYDLVAGRQLLHFSRYYSTKQSVELFPTLAREVNNRSLRGTVVYYDGQMNDSRLNVGL ACTAALAGAAVLNHAEVVSLLKDDAGERIIGVRIRDNLTGKEFDTYAKVILNASGPFCDSIRKMANKNSQEMIAPSSGVH IILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSSTAITYLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAW SGIRPLAVDPTAKNTESISRDHVVCEDYPGLVTITGGKWTTYRSMAEDAVNAAIKSGKLTPTIGCVTKNLAIVGGEGWEP SSFTVLAQQYKRMKTTHGKVVPGAMDTAAAKHLSQAYGTLAERVAAIAQVSIYLNSLAFFCEWLVGGLAVLVVIVIAICS L
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 19 | 19 | 7.0 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 535 | 535 | 0.0 | – | |
| PANTHER | 1 | 535 | 535 | 0.0 | ||
| Phobius | 1 | 6 | 6 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 7 | 15 | 9 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 536 | 516 | - | – | |
| PRINTS | 74 | 86 | 13 | 3.6E-32 | ||
| SUPERFAMILY | 74 | 339 | 266 | 1.51E-36 | ||
| Pfam | 75 | 443 | 369 | 1.2E-49 | ||
| Gene3D | 75 | 450 | 376 | 1.5E-129 | ||
| ProSitePatterns | 79 | 96 | 18 | - | ||
| PRINTS | 87 | 97 | 11 | 3.6E-32 | ||
| PRINTS | 103 | 115 | 13 | 3.6E-32 | ||
| PRINTS | 155 | 167 | 13 | 3.6E-32 | ||
| Gene3D | 159 | 407 | 249 | 1.5E-129 | – | |
| SUPERFAMILY | 314 | 406 | 93 | 5.49E-6 | – | |
| PRINTS | 400 | 406 | 7 | 3.6E-32 | ||
| PRINTS | 431 | 443 | 13 | 3.6E-32 | ||
| ProSitePatterns | 436 | 446 | 11 | - | – | |
| Pfam | 465 | 530 | 66 | 3.2E-9 | ||
| TMHMM | 536 | 558 | 23 | - | – | |
| Phobius | 537 | 559 | 23 | - | – | |
| Phobius | 560 | 561 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glycerol-3-phosphate dehydrogenase (quinone) activity | Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol. | ||
| Biological process | Glycerol-3-phosphate metabolic process | The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol. | ||
| Cellular component | Glycerol-3-phosphate dehydrogenase complex | An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0270500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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