Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PIRSF002417

Source: PIRSF

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005615 View details of GO:0005615 AmiGO InterPro QuickGO	Cellular component	Extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.	Subterm of GO:0044421
GO:0008289 View details of GO:0008289 AmiGO InterPro QuickGO	Molecular function	Lipid binding	Interacting selectively and non-covalently with a lipid.	Subterm of GO:0005488

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v2856000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipid-binding serum glycoprotein family protein isoform 1 [Theobroma cacao] gi\|508701508\|gb\|EOX93404.1\|	Domains G3DSA:3.15.10.10 G3DSA:3.15.20.10 IPR001124 IPR017942 IPR017943 IPR030675 IPR032942 NON_CYTOPLASMIC_DOMAIN PF01273 PF02886 PIRSF002417 PTHR10504 PTHR10504:SF73 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00328 SM00329 SSF55394 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd00025 cd00026	25
Lj2g3v3224210.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bactericidal permeability-increasing protein [Medicago truncatula] gi\|357494733\|ref\|XP_003617655.1\|	Domains G3DSA:3.15.10.10 G3DSA:3.15.20.10 IPR001124 IPR017942 IPR017943 IPR030675 IPR032942 NON_CYTOPLASMIC_DOMAIN PF01273 PF02886 PIRSF002417 PTHR10504 PTHR10504:SF73 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00328 SM00329 SSF55394 SignalP-noTM_EUK	21
Lj6g3v0819000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bactericidal permeability-increasing protein [Medicago truncatula] gi\|357494733\|ref\|XP_003617655.1\|	Domains G3DSA:3.15.10.10 G3DSA:3.15.20.10 IPR001124 IPR017942 IPR017943 IPR030675 IPR032942 NON_CYTOPLASMIC_DOMAIN PF01273 PF02886 PIRSF002417 PTHR10504 PTHR10504:SF73 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00328 SM00329 SSF55394 SignalP-noTM_EUK	21
LotjaGi1g1v0069000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipid-binding serum glycoprotein; TAIR: AT1G04970.1 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp\|Q9MAU5\|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr\|A0A0B2SIV3\|A0A0B2SIV3_GLYSO Putative BPI/LBP family protein; Found in the gene: LotjaGi1g1v0069000	Domains G3DSA:3.15.10.10 G3DSA:3.15.20.10 IPR001124 IPR017942 IPR017943 IPR030675 NON_CYTOPLASMIC_DOMAIN PF01273 PF02886 PIRSF002417 PTHR46801 PTHR46801:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00328 SM00329 SSF55394 SignalP-TM SignalP-noTM cd00025 cd00026	23
LotjaGi6g1v0153400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lipid-binding serum glycoprotein family protein, putative; TAIR: AT1G04970.1 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp\|Q9MAU5\|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr\|V7BPL8\|V7BPL8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0153400	Domains G3DSA:3.15.10.10 G3DSA:3.15.20.10 IPR001124 IPR017942 IPR017943 IPR030675 NON_CYTOPLASMIC_DOMAIN PF01273 PF02886 PIRSF002417 PTHR46801 PTHR46801:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00328 SM00329 SSF55394 SignalP-noTM cd00025	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00025	CDD	1	20.00