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PIRSF500824

Source: PIRSF

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000162
Biological process Tryptophan biosynthetic process The chemical reactions and pathways resulting in the formation of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; tryptophan is synthesized from chorismate via anthranilate.
Subterm of
GO:0004834
Molecular function Tryptophan synthase activity Catalysis of the reaction: L-serine + (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
LotjaGi2g1v0059100.1
– Tryptophan synthase beta chain; TAIR: AT5G38530.1 tryptophan synthase beta type 2; Swiss-Prot: sp|Q8Q001|TRPB2_METMA Tryptophan synthase beta chain 2; TrEMBL-Plants: tr|A0A072U669|A0A072U669_MEDTR Tryptophan synthase beta chain; Found in the gene: LotjaGi2g1v0059100
Domains
16
LotjaGi2g1v0059100.2
– Tryptophan synthase beta chain; TAIR: AT5G38530.1 tryptophan synthase beta type 2; Swiss-Prot: sp|Q8Q001|TRPB2_METMA Tryptophan synthase beta chain 2; TrEMBL-Plants: tr|A0A072U669|A0A072U669_MEDTR Tryptophan synthase beta chain; Found in the gene: LotjaGi2g1v0059100
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd06446 CDD 1 50.00