Domain Predictions — View

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PR00942

Source: PRINTS

Description

Copper-transporting ATPase 1 signature

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0126429.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: copper-transporting ATPase RAN1-like isoform X1 [Cicer arietinum] gi\|502141829\|ref\|XP_004504659.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.10 G3DSA:3.30.70.100 IPR006121 IPR006122 IPR008250 IPR017969 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PR00942 PS01047 PS50846 PTHR24093 PTHR24093:SF360 SSF55008 SSF81653 TIGR00003 TMhelix TRANSMEMBRANE cd00371	21
Lj2g3v2017620.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Heavy metal P-type ATPase [Medicago truncatula] gi\|357518503\|ref\|XP_003629540.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.10 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023299 IPR027256 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS01047 PS50846 PTHR24093 PTHR24093:SF315 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371	35
LotjaGi2g1v0433300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|G7KDC8\|G7KDC8_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi2g1v0433300	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PR00943 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF21 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	42
LotjaGi2g1v0433500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|A0A1J7G3K0\|A0A1J7G3K0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433500	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF21 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	41
LotjaGi3g1v0088800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|A0A0B2SKR1\|A0A0B2SKR1_GLYSO Putative copper-transporting ATPase 3; Found in the gene: LotjaGi3g1v0088800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS50846 PTHR46594 PTHR46594:SF2 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	37
LotjaGi6g1v0243100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp\|Q9S7J8\|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr\|A0A151T5L3\|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF20 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094 mobidb-lite	42
LotjaGi6g1v0243100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp\|Q9S7J8\|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr\|A0A151T5L3\|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF20 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094 mobidb-lite	42

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29