Domain Predictions — View

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PR00943

Source: PRINTS

Description

Copper-transporting ATPase signature

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj4g3v0341080.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cicer arietinum] gi\|502142103\|ref\|XP_004504792.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.10 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR017969 IPR018303 IPR023214 IPR023299 IPR027256 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00943 PS00154 PS01047 PS50846 PTHR24093 PTHR24093:SF124 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01511 TIGR01525 TMhelix TRANSMEMBRANE cd00371	34
LotjaGi2g1v0433300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|G7KDC8\|G7KDC8_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi2g1v0433300	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PR00943 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF21 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	42
LotjaGi4g1v0034800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT4G33520.2 P-type ATP-ase 1; Swiss-Prot: sp\|Q9SZC9\|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic; TrEMBL-Plants: tr\|A0A0R0JZ81\|A0A0R0JZ81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0034800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PTHR43520 PTHR43520:SF22 SFLDF00027 SFLDG00002 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01511 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE	31
LotjaGi4g1v0034800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT4G33520.2 P-type ATP-ase 1; Swiss-Prot: sp\|Q9SZC9\|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic; TrEMBL-Plants: tr\|I1KR29\|I1KR29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0034800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00943 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF22 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01511 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094 mobidb-lite	42
LotjaGi4g1v0304700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A0B2QSM7\|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi4g1v0304700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp\|Q9SZW4\|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr\|A0A0B2QSM7\|A0A0B2QSM7_GLYSO Cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi4g1v0304700	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PS01229 PS50846 PTHR43338 PTHR43338:SF4 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd02079 mobidb-lite	38
LotjaGi6g1v0243100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp\|Q9S7J8\|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr\|A0A151T5L3\|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PTHR43520 PTHR43520:SF20 SFLDF00027 SFLDS00003 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd02094	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02094	CDD	1	14.29