Domain Predictions — View

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cd02094

Source: CDD

Description

P-type_ATPase_Cu-like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi2g1v0433300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|G7KDC8\|G7KDC8_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi2g1v0433300	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PR00943 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF21 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	42
LotjaGi2g1v0433500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|A0A1J7G3K0\|A0A1J7G3K0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433500	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF21 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	41
LotjaGi3g1v0088800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|A0A0B2SKR1\|A0A0B2SKR1_GLYSO Putative copper-transporting ATPase 3; Found in the gene: LotjaGi3g1v0088800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS50846 PTHR46594 PTHR46594:SF2 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	37
LotjaGi3g1v0088800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|G7LF66\|G7LF66_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi3g1v0088800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00120 PS00154 PS01047 PS50846 PTHR46594 PTHR46594:SF2 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094 mobidb-lite	42
LotjaGi3g1v0493500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT1G63440.1 heavy metal atpase 5; Swiss-Prot: sp\|Q9SH30\|HMA5_ARATH Probable copper-transporting ATPase HMA5; TrEMBL-Plants: tr\|A0A0B2SKR1\|A0A0B2SKR1_GLYSO Putative copper-transporting ATPase 3; Found in the gene: LotjaGi3g1v0493500	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00120 PS00154 PS01047 PS50846 PTHR46594 PTHR46594:SF2 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	39
LotjaGi4g1v0020900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp\|Q9S7J8\|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr\|A0A072V003\|A0A072V003_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi4g1v0020900	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00120 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF20 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	41
LotjaGi4g1v0020900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp\|Q9S7J8\|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr\|A0A072V003\|A0A072V003_MEDTR Heavy metal P-type ATPase; Found in the gene: LotjaGi4g1v0020900	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00120 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF20 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094	41
LotjaGi4g1v0034800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT4G33520.2 P-type ATP-ase 1; Swiss-Prot: sp\|Q9SZC9\|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic; TrEMBL-Plants: tr\|I1KR29\|I1KR29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0034800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00943 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF22 SFLDF00027 SFLDS00003 SSF55008 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01511 TIGR01512 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094 mobidb-lite	42
LotjaGi6g1v0243100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp\|Q9S7J8\|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr\|A0A151T5L3\|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF20 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094 mobidb-lite	42
LotjaGi6g1v0243100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp\|Q9S7J8\|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr\|A0A151T5L3\|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.30.70.100 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR006121 IPR006122 IPR008250 IPR017969 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036163 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00403 PF00702 PR00119 PR00942 PS00154 PS01047 PS50846 PTHR43520 PTHR43520:SF20 SFLDF00027 SFLDG00002 SSF55008 SSF56784 SSF81653 SSF81665 TIGR00003 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd00371 cd02094 mobidb-lite	42
LotjaGi6g1v0243100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp\|Q9S7J8\|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr\|A0A151T5L3\|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.70.150.20 G3DSA:3.40.1110.10 G3DSA:3.40.50.1000 IPR001757 IPR008250 IPR018303 IPR023214 IPR023298 IPR023299 IPR027256 IPR036412 NON_CYTOPLASMIC_DOMAIN PF00122 PF00702 PR00119 PR00943 PS00154 PTHR43520 PTHR43520:SF20 SFLDF00027 SFLDS00003 SSF56784 SSF81653 SSF81665 TIGR01494 TIGR01525 TMhelix TRANSMEMBRANE cd02094	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02094	CDD	1	9.09