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Gamma-tubulin signature
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Gamma-tubulin complex | A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species. | ||
| Biological process | Microtubule nucleation | The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation). | ||
| Biological process | Cytoplasmic microtubule organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: tubulin gamma-1 chain-like isoform X1 [Cicer arietinum] gi|502113903|ref|XP_004494797.1| | 22 | ||
| – | PREDICTED: tubulin gamma-1 chain-like isoform X1 [Cicer arietinum] gi|502113903|ref|XP_004494797.1| | 15 | ||
| – | Tubulin gamma-1 chain protein [Medicago truncatula] gi|357512519|ref|XP_003626548.1| | 22 | ||
| – | Gamma-tubulin [Vigna angularis] gi|187761602|dbj|BAG31940.1| | 14 | ||
| – | Tubulin beta chain; TAIR: AT3G61650.1 gamma-tubulin; Swiss-Prot: sp|P38557|TBG1_ARATH Tubulin gamma-1 chain; TrEMBL-Plants: tr|G7L416|G7L416_MEDTR Tubulin gamma chain; Found in the gene: LotjaGi1g1v0042300 | 24 | ||
| – | Tubulin beta chain; TAIR: AT3G61650.1 gamma-tubulin; Swiss-Prot: sp|P38557|TBG1_ARATH Tubulin gamma-1 chain; TrEMBL-Plants: tr|G7L416|G7L416_MEDTR Tubulin gamma chain; Found in the gene: LotjaGi1g1v0042300 | 24 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT5G05620.1 gamma-tubulin complex protein 2; Swiss-Prot: sp|Q41808|TBG2_MAIZE Tubulin gamma-2 chain; TrEMBL-Plants: tr|B9FMK1|B9FMK1_ORYSJ Dihydrolipoyl dehydrogenase; Found in the gene: LotjaGi1g1v0084400_LC | 13 | ||
| – | Tubulin beta chain; TAIR: AT3G61650.1 gamma-tubulin; Swiss-Prot: sp|P38557|TBG1_ARATH Tubulin gamma-1 chain; TrEMBL-Plants: tr|G7L416|G7L416_MEDTR Tubulin gamma chain; Found in the gene: LotjaGi1g1v0545200 | 24 | ||
| – | Tubulin beta chain; TAIR: AT3G61650.1 gamma-tubulin; Swiss-Prot: sp|P38557|TBG1_ARATH Tubulin gamma-1 chain; TrEMBL-Plants: tr|G7L416|G7L416_MEDTR Tubulin gamma chain; Found in the gene: LotjaGi1g1v0545200 | 24 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd02188 | CDD | 1 | 5.56 |