Domain Predictions — View

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PS00213

Source: ProSitePatterns

Description

Lipocalin signature.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0105139.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: outer membrane lipoprotein blc-like [Cicer arietinum] gi\|502149930\|ref\|XP_004507714.1\|	Domains G3DSA:2.40.128.20 IPR000566 IPR002446 IPR011038 IPR012674 IPR022271 IPR022272 PF08212 PIRSF036893 PR01171 PS00213 PTHR10612 PTHR10612:SF19 SSF50814 mobidb-lite	15
Lj1g3v5021040.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Violaxanthin de-epoxidase, chloroplastic-like [Glycine max] gi\|359806202\|ref\|NP_001240949.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.40.128.20 IPR010788 IPR011038 IPR012674 IPR022272 NON_CYTOPLASMIC_DOMAIN PF07137 PS00213 PTHR33970 PTHR33970:SF1 SSF50814 TRANSMEMBRANE	14
Lj6g3v1078560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: outer membrane lipoprotein blc-like [Cicer arietinum] gi\|502149930\|ref\|XP_004507714.1\|	Domains G3DSA:2.40.128.20 IPR000566 IPR002446 IPR011038 IPR012674 IPR022271 IPR022272 PF08212 PIRSF036893 PR01171 PS00213 PTHR10612 PTHR10612:SF19 SSF50814 mobidb-lite	15
LotjaGi1g1v0034700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Apolipoprotein D; TAIR: AT3G47860.1 chloroplastic lipocalin; Swiss-Prot: sp\|Q9STS7\|CHL_ARATH Chloroplastic lipocalin; TrEMBL-Plants: tr\|I3S940\|I3S940_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0034700	Domains Coil G3DSA:2.40.128.20 IPR000566 IPR002345 IPR012674 IPR022272 PF08212 PS00213 PTHR11430 PTHR11430:SF32 SSF50814	11
LotjaGi1g1v0787600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Violaxanthin de-epoxidase; TAIR: AT1G08550.1 non-photochemical quenching 1; Swiss-Prot: sp\|Q9SM43\|VDE_SPIOL Violaxanthin de-epoxidase, chloroplastic; TrEMBL-Plants: tr\|A0A151TXT8\|A0A151TXT8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0787600	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.40.128.20 IPR010788 IPR012674 IPR022272 NON_CYTOPLASMIC_DOMAIN PF07137 PS00213 PTHR33970 PTHR33970:SF1 SSF50814 TRANSMEMBRANE	13
LotjaGi4g1v0285700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Temperature-induced lipocalin; TAIR: AT5G58070.1 temperature-induced lipocalin; Swiss-Prot: sp\|Q9FGT8\|TIL_ARATH Temperature-induced lipocalin-1; TrEMBL-Plants: tr\|I3T3W6\|I3T3W6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0285700	Domains G3DSA:2.40.128.20 IPR000566 IPR002446 IPR012674 IPR022271 IPR022272 PF08212 PIRSF036893 PR01171 PS00213 PTHR10612 PTHR10612:SF44 SSF50814 mobidb-lite	14
LotjaGi6g1v0205600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Temperature-induced lipocalin; TAIR: AT5G58070.1 temperature-induced lipocalin; Swiss-Prot: sp\|Q9FGT8\|TIL_ARATH Temperature-induced lipocalin-1; TrEMBL-Plants: tr\|I3TAJ2\|I3TAJ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0205600	Domains G3DSA:2.40.128.20 IPR000566 IPR002446 IPR012674 IPR022271 IPR022272 PF08212 PIRSF036893 PR01171 PS00213 PTHR10612 PTHR10612:SF44 SSF50814 mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29