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Calreticulin family
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: calnexin homolog [Glycine max] gi|356508884|ref|XP_003523183.1| | 27 | ||
| – | Calreticulin-3 [Medicago truncatula] gi|357507831|ref|XP_003624204.1| | 25 | ||
| – | Calreticulin-3 [Arabidopsis thaliana] gi|18390896|ref|NP_563816.1| | 13 | ||
| – | PREDICTED: calnexin homolog isoform X2 [Cicer arietinum] gi|502139546|ref|XP_004503810.1| | 26 | ||
| – | Calreticulin [Medicago truncatula] gi|357441869|ref|XP_003591212.1| | 26 | ||
| – | Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp|Q39817|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr|A0A0R0KAL0|A0A0R0KAL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331500 | 27 | ||
| – | Calreticulin; TAIR: AT1G08450.1 calreticulin 3; Swiss-Prot: sp|O04153|CALR3_ARATH Calreticulin-3; TrEMBL-Plants: tr|V7B1D3|V7B1D3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0487200 | 25 | ||
| – | Calreticulin; TAIR: AT1G08450.1 calreticulin 3; Swiss-Prot: sp|O04153|CALR3_ARATH Calreticulin-3; TrEMBL-Plants: tr|I3SD85|I3SD85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500600 | 23 | ||
| – | Calreticulin; TAIR: AT1G08450.1 calreticulin 3; Swiss-Prot: sp|O04153|CALR3_ARATH Calreticulin-3; TrEMBL-Plants: tr|I3SD85|I3SD85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500600 | 23 | ||
| – | Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp|Q39817|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr|A0A151S2C8|A0A151S2C8_CAJCA Calnexin isogeny; Found in the gene: LotjaGi4g1v0416900 | 26 | ||
| – | Calreticulin/calnexin; TAIR: AT5G61790.1 calnexin 1; Swiss-Prot: sp|Q39817|CALX_SOYBN Calnexin homolog; TrEMBL-Plants: tr|A0A151S2C8|A0A151S2C8_CAJCA Calnexin isogeny; Found in the gene: LotjaGi4g1v0416900 | 26 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 9.09 |