Domain Predictions — View

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PS50903

Source: ProSiteProfiles

Description

Rubredoxin-like domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005506 View details of GO:0005506 AmiGO InterPro QuickGO	Molecular function	Iron ion binding	Interacting selectively and non-covalently with iron (Fe) ions.	Subterm of GO:0046914

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4957690.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: rubredoxin-like [Cicer arietinum] gi\|502113516\|ref\|XP_004494675.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR004039 IPR018527 IPR024934 IPR024935 NON_CYTOPLASMIC_DOMAIN PF00301 PR00163 PS00202 PS50903 PTHR10909 SSF57802 TMhelix TRANSMEMBRANE cd00730 mobidb-lite	17
Lj2g3v2124630.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein [Theobroma cacao] gi\|508718096\|gb\|EOY09993.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 G3DSA:2.30.42.10 IPR001478 IPR004039 IPR024934 NON_CYTOPLASMIC_DOMAIN PS50106 PS50903 PTHR17130 SSF50156 SSF57802 TMhelix TRANSMEMBRANE cd00136	15
Lj4g3v2871730.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin-like superfamily protein [Theobroma cacao] gi\|508775414\|gb\|EOY22670.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR004039 IPR024934 NON_CYTOPLASMIC_DOMAIN PS50903 PTHR17130 PTHR17130:SF25 SSF57802 TMhelix TRANSMEMBRANE	11
LotjaGi1g1v0332100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein; TAIR: AT5G51010.1 Rubredoxin-like superfamily protein; Swiss-Prot: sp\|P24297\|RUBR_PYRFU Rubredoxin; TrEMBL-Plants: tr\|I3SUV2\|I3SUV2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0332100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR024934 IPR024935 NON_CYTOPLASMIC_DOMAIN PF00301 PS50903 SSF57802 TMhelix TRANSMEMBRANE cd00730	11
LotjaGi2g1v0447900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein; TAIR: AT5G17170.1 rubredoxin family protein; Swiss-Prot: sp\|O26258\|RUBR_METTH Probable rubredoxin; TrEMBL-Plants: tr\|I3TAC3\|I3TAC3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0447900	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 G3DSA:2.30.42.10 IPR001478 IPR024934 IPR036034 NON_CYTOPLASMIC_DOMAIN PS50106 PS50903 PTHR47661 SSF50156 SSF57802 TMhelix TRANSMEMBRANE cd00136	15
LotjaGi4g1v0422800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein; TAIR: AT5G51010.1 Rubredoxin-like superfamily protein; Swiss-Prot: sp\|P04170\|RUBR1_DESDA Rubredoxin-1; TrEMBL-Plants: tr\|I3SV91\|I3SV91_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0422800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR024934 NON_CYTOPLASMIC_DOMAIN PS50903 SSF57802 TMhelix TRANSMEMBRANE	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	16.67