Domain Predictions — View

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IPR004039

Source: InterPro

Description

IPR004039 is a .

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0162139.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-related isoform 1 [Theobroma cacao] gi\|508708206\|gb\|EOY00103.1\|	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF9 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	24
Lj1g3v3354070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Glycine max] gi\|356555553\|ref\|XP_003546095.1\|	Domains G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR013083 IPR031109 PF13639 PF14599 PS50089 PTHR21319 PTHR21319:SF5 SM00184 SSF57850 cd00162	14
Lj1g3v3354070.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Glycine max] gi\|356555553\|ref\|XP_003546095.1\|	Domains G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR013083 IPR017921 IPR031109 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF5 SM00184 SSF161219 SSF161245 SSF57850 cd00162	21
Lj1g3v4289040.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA replication licensing factor mcm4-B-like [Cicer arietinum] gi\|502149334\|ref\|XP_004507486.1\|	Domains G3DSA:2.20.28.10 IPR004039 IPR012340 IPR033762 PF17207 PTHR11630 PTHR11630:SF66 SSF50249	8
Lj1g3v4579080.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DNA helicase MCM8-like [Cicer arietinum] gi\|502111051\|ref\|XP_004493943.1\|	Domains G3DSA:2.20.28.10 G3DSA:2.40.50.140 IPR001208 IPR004039 IPR012340 IPR031327 IPR033762 PF00493 PF17207 PS50051 PTHR11630 PTHR11630:SF47 SM00350 SSF50249	14
Lj1g3v4917520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Glycine max] gi\|356505514\|ref\|XP_003521535.1\|	Domains G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR013083 IPR017921 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF12 SM00184 SSF161219 SSF161245 SSF57850 cd00162	20
Lj1g3v4957690.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: rubredoxin-like [Cicer arietinum] gi\|502113516\|ref\|XP_004494675.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR004039 IPR018527 IPR024934 IPR024935 NON_CYTOPLASMIC_DOMAIN PF00301 PR00163 PS00202 PS50903 PTHR10909 SSF57802 TMhelix TRANSMEMBRANE cd00730 mobidb-lite	17
Lj2g3v0719120.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-like protein [Medicago truncatula] gi\|357500299\|ref\|XP_003620438.1\|	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF0 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	24
Lj2g3v2124630.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein [Theobroma cacao] gi\|508718096\|gb\|EOY09993.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 G3DSA:2.30.42.10 IPR001478 IPR004039 IPR024934 NON_CYTOPLASMIC_DOMAIN PS50106 PS50903 PTHR17130 SSF50156 SSF57802 TMhelix TRANSMEMBRANE cd00136	15
Lj3g3v3033270.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Glycine max] gi\|356539356\|ref\|XP_003538164.1\|	Domains G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR013083 IPR017921 IPR027370 PF05495 PF13445 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF11 SM00184 SSF161219 SSF161245 SSF57850 cd00162 mobidb-lite	22
Lj4g3v2871730.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin-like superfamily protein [Theobroma cacao] gi\|508775414\|gb\|EOY22670.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR004039 IPR024934 NON_CYTOPLASMIC_DOMAIN PS50903 PTHR17130 PTHR17130:SF25 SSF57802 TMhelix TRANSMEMBRANE	11
Lj4g3v3099530.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-like protein [Medicago truncatula] gi\|357500299\|ref\|XP_003620438.1\|	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF0 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	24
Lj4g3v3099540.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger protein-like protein [Medicago truncatula] gi\|357500299\|ref\|XP_003620438.1\|	Domains G3DSA:1.20.120.520 G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR012312 IPR013083 IPR017921 PF01814 PF05495 PF13639 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF0 SM00184 SSF161219 SSF161245 SSF57850 cd00162 cd12108	24
Lj6g3v1918320.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING finger and CHY zinc finger domain-containing protein [Medicago truncatula] gi\|357447417\|ref\|XP_003593984.1\|	Domains G3DSA:2.20.28.10 G3DSA:3.30.40.10 IPR001841 IPR004039 IPR008913 IPR013083 IPR017921 IPR031109 PF05495 PF14599 PS50089 PS51266 PS51270 PTHR21319 PTHR21319:SF5 SM00184 SSF161219 SSF161245 SSF57850 cd00162	20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00162	CDD	1	7.14