Domain Predictions — View

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SSF57802

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 10

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4957690.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: rubredoxin-like [Cicer arietinum] gi\|502113516\|ref\|XP_004494675.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR004039 IPR018527 IPR024934 IPR024935 NON_CYTOPLASMIC_DOMAIN PF00301 PR00163 PS00202 PS50903 PTHR10909 SSF57802 TMhelix TRANSMEMBRANE cd00730 mobidb-lite	17
Lj2g3v2124630.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein [Theobroma cacao] gi\|508718096\|gb\|EOY09993.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 G3DSA:2.30.42.10 IPR001478 IPR004039 IPR024934 NON_CYTOPLASMIC_DOMAIN PS50106 PS50903 PTHR17130 SSF50156 SSF57802 TMhelix TRANSMEMBRANE cd00136	15
Lj3g3v0115940.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytochrome c oxidase subunit 5B [Medicago truncatula] gi\|357455121\|ref\|XP_003597841.1\|	Domains G3DSA:2.60.11.10 IPR002124 PD007270 PF01215 PS51359 PTHR10122 PTHR10122:SF3 SSF57802 SignalP-TM_GRAM_POSITIVE cd00924	10
Lj3g3v2235770.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cicer arietinum] gi\|502080835\|ref\|XP_004486697.1\|	Domains G3DSA:2.60.11.10 IPR002124 NON_CYTOPLASMIC_DOMAIN PD007270 PF01215 PS51359 PTHR10122 PTHR10122:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF57802 SignalP-TM_GRAM_POSITIVE cd00924	15
Lj4g3v2871730.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin-like superfamily protein [Theobroma cacao] gi\|508775414\|gb\|EOY22670.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR004039 IPR024934 NON_CYTOPLASMIC_DOMAIN PS50903 PTHR17130 PTHR17130:SF25 SSF57802 TMhelix TRANSMEMBRANE	11
LotjaGi1g1v0332100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein; TAIR: AT5G51010.1 Rubredoxin-like superfamily protein; Swiss-Prot: sp\|P24297\|RUBR_PYRFU Rubredoxin; TrEMBL-Plants: tr\|I3SUV2\|I3SUV2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0332100	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR024934 IPR024935 NON_CYTOPLASMIC_DOMAIN PF00301 PS50903 SSF57802 TMhelix TRANSMEMBRANE cd00730	11
LotjaGi2g1v0447900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein; TAIR: AT5G17170.1 rubredoxin family protein; Swiss-Prot: sp\|O26258\|RUBR_METTH Probable rubredoxin; TrEMBL-Plants: tr\|I3TAC3\|I3TAC3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0447900	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 G3DSA:2.30.42.10 IPR001478 IPR024934 IPR036034 NON_CYTOPLASMIC_DOMAIN PS50106 PS50903 PTHR47661 SSF50156 SSF57802 TMhelix TRANSMEMBRANE cd00136	15
LotjaGi3g1v0012200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytochrome c oxidase subunit 5B, mitochondrial; TAIR: AT1G80230.1 Rubredoxin-like superfamily protein; Swiss-Prot: sp\|Q9SSB8\|CX5B2_ARATH Cytochrome c oxidase subunit 5b-2, mitochondrial; TrEMBL-Plants: tr\|G7IMH7\|G7IMH7_MEDTR Cytochrome C oxidase subunit 5b; Found in the gene: LotjaGi3g1v0012200	Domains G3DSA:2.60.11.10 IPR002124 IPR036972 PF01215 PS51359 PTHR10122 PTHR10122:SF14 SSF57802 SignalP-TM cd00924	10
LotjaGi3g1v0359400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cytochrome c oxidase subunit 5B, mitochondrial; TAIR: AT1G80230.1 Rubredoxin-like superfamily protein; Swiss-Prot: sp\|Q9SSB8\|CX5B2_ARATH Cytochrome c oxidase subunit 5b-2, mitochondrial; TrEMBL-Plants: tr\|I3SVI7\|I3SVI7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0359400	Domains G3DSA:2.60.11.10 IPR002124 IPR036972 NON_CYTOPLASMIC_DOMAIN PF01215 PS51359 PTHR10122 PTHR10122:SF14 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF57802 SignalP-TM cd00924	15
LotjaGi4g1v0422800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Rubredoxin family protein; TAIR: AT5G51010.1 Rubredoxin-like superfamily protein; Swiss-Prot: sp\|P04170\|RUBR1_DESDA Rubredoxin-1; TrEMBL-Plants: tr\|I3SV91\|I3SV91_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0422800	Domains CYTOPLASMIC_DOMAIN G3DSA:2.20.28.10 IPR024934 NON_CYTOPLASMIC_DOMAIN PS50903 SSF57802 TMhelix TRANSMEMBRANE	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	10.00