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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0975690 |
| Transcript ID | Lj5g3v0975690.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max] gi|356535940|ref|XP_003536499.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 327 | 327 | 1.60E-210 | – | |
| PANTHER | 1 | 327 | 327 | 1.60E-210 | – | |
| ProSiteProfiles | 6 | 171 | 166 | 9.019 | ||
| SUPERFAMILY | 10 | 210 | 201 | 8.36E-28 | ||
| Gene3D | 10 | 178 | 169 | 7.00E-27 | ||
| SMART | 13 | 178 | 166 | 4.30E-04 | – | |
| PRINTS | 13 | 34 | 22 | 9.50E-08 | – | |
| Pfam | 15 | 175 | 161 | 3.30E-14 | ||
| SMART | 15 | 178 | 164 | 1.70E-09 | – | |
| PRINTS | 114 | 127 | 14 | 9.50E-08 | – | |
| PRINTS | 153 | 175 | 23 | 9.50E-08 | – | |
| SUPERFAMILY | 181 | 274 | 94 | 3.18E-11 | ||
| Gene3D | 196 | 228 | 33 | 1.10E-04 | ||
| ProSitePatterns | 206 | 218 | 13 | – | ||
| Pfam | 228 | 313 | 86 | 6.80E-29 | ||
| Gene3D | 311 | 338 | 28 | 1.10E-04 | ||
| SUPERFAMILY | 316 | 344 | 29 | 3.18E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj5g3v0975690.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0975690.2, powered by CORGI.
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