Domain Predictions — View

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PTHR11439:SF264

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 24

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0223000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0223000_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF264	4
LotjaGi1g1v0226500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0226500_LC	Domains IPR013103 NON_CYTOPLASMIC_DOMAIN PF07727 PTHR11439 PTHR11439:SF264 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM mobidb-lite	11
LotjaGi1g1v0240900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TFT3\|A0A151TFT3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0240900_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672	6
LotjaGi1g1v0255700_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P92520\|M820_ARATH Uncharacterized mitochondrial protein AtMg00820; TrEMBL-Plants: tr\|A0A1J3IBS4\|A0A1J3IBS4_NOCCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0255700_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF264	4
LotjaGi1g1v0399900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QUV8\|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0399900_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672 mobidb-lite	7
LotjaGi2g1v0018300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5B506\|A5B506_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0018300_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672	6
LotjaGi2g1v0076500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151R7U0\|A0A151R7U0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0076500	Domains Coil G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR012337 IPR013103 IPR025314 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13961 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF264 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	24
LotjaGi2g1v0099300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp\|P92520\|M820_ARATH Uncharacterized mitochondrial protein AtMg00820; TrEMBL-Plants: tr\|Q84VH6\|Q84VH6_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi2g1v0099300_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF264	4
LotjaGi2g1v0114400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P25600\|YCH4_YEAST Putative transposon Ty5-1 protein YCL074W; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi2g1v0114400_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672	6
LotjaGi2g1v0141800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp\|P92520\|M820_ARATH Uncharacterized mitochondrial protein AtMg00820; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi2g1v0141800_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF264	4
LotjaGi2g1v0229000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RL25\|A0A151RL25_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0229000_LC	Domains PTHR11439 PTHR11439:SF264 mobidb-lite	4
LotjaGi2g1v0336200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P92520\|M820_ARATH Uncharacterized mitochondrial protein AtMg00820; TrEMBL-Plants: tr\|A0A151RPH1\|A0A151RPH1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0336200_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF264	4
LotjaGi2g1v0336200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P92520\|M820_ARATH Uncharacterized mitochondrial protein AtMg00820; TrEMBL-Plants: tr\|A0A151RPH1\|A0A151RPH1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0336200_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF264	4
LotjaGi2g1v0357500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|W9QMZ8\|W9QMZ8_9ROSA ABC transporter C family member 9; Found in the gene: LotjaGi2g1v0357500_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672	6
LotjaGi2g1v0414600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G20980.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|P25601\|YCH5_YEAST Putative transposon Ty5-1 protein YCL075W; TrEMBL-Plants: tr\|A0A151SFK6\|A0A151SFK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0414600_LC	Domains Coil PTHR11439 PTHR11439:SF264 mobidb-lite	5
LotjaGi3g1v0214300_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0214300_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672	6
LotjaGi3g1v0311000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q84VH6\|Q84VH6_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi3g1v0311000_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672	6
LotjaGi3g1v0325800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P92520\|M820_ARATH Uncharacterized mitochondrial protein AtMg00820; TrEMBL-Plants: tr\|A0A151QUV8\|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0325800_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF264 mobidb-lite	5
LotjaGi4g1v0211200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi4g1v0211200_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672	6
LotjaGi5g1v0125000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi5g1v0125000_LC	Domains IPR013103 PF07727 PTHR11439 PTHR11439:SF264	4
LotjaGi5g1v0197300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151SUC2\|A0A151SUC2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0197300_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672 cd09272 mobidb-lite	8
LotjaGi6g1v0087500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q84VI2\|Q84VI2_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi6g1v0087500_LC	Domains IPR013103 IPR043502 NON_CYTOPLASMIC_DOMAIN PF07727 PTHR11439 PTHR11439:SF264 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56672	11
LotjaGi6g1v0111500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi6g1v0111500_LC	Domains IPR013103 IPR043502 PF07727 PTHR11439 PTHR11439:SF264 SSF56672 mobidb-lite	7
LotjaGi6g1v0319500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QUV8\|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0319500_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR036397 IPR043502 PF00665 PF07727 PS50994 PTHR11439 PTHR11439:SF264 SSF53098 SSF56672	13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF56672	SUPERFAMILY	1	4.17