Domain Predictions — View

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PF14223

Source: Pfam

Description

gag-polypeptide of LTR copia-type

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 291

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0035179.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Integrase core domain containing protein [Solanum demissum] gi\|113205290\|gb\|ABI34329.1\|	Domains PF14223 PTHR34222 PTHR34222:SF2	4
Lj0g3v0043939.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-protease polyprotein [Glycine max] gi\|351721388\|ref\|NP_001235160.1\|	Domains IPR025314 PF13961 PF14223 PTHR11439	4
Lj0g3v0046579.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Integrase core domain containing protein [Solanum demissum] gi\|113205290\|gb\|ABI34329.1\|	Domains PF14223 PTHR34222 PTHR34222:SF2	4
Lj0g3v0060009.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Resistance gene analog protein [Medicago truncatula] gi\|357499393\|ref\|XP_003619985.1\|	Domains PF14223	2
Lj0g3v0070539.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta-galactosidase [Medicago truncatula] gi\|357453875\|ref\|XP_003597218.1\|	Domains PF14223 PTHR34222 PTHR34222:SF2	4
Lj0g3v0073799.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	T4.5 [Malus x robusta] gi\|400131566\|emb\|CCH50966.1\|	Domains PF14223 PTHR11439	3
Lj0g3v0113249.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein [Phaseolus vulgaris] gi\|38194910\|gb\|AAR13298.1\|	Domains Coil PF14223	3
Lj0g3v0118979.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Os03g0835200 [Oryza sativa Japonica Group] gi\|115456431\|ref\|NP_001051816.1\|	Domains Coil PF14223 PTHR11439 PTHR11439:SF185	5
Lj0g3v0136409.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein [Glycine max] gi\|3777527\|gb\|AAC64917.1\|	Domains PF14223	2
Lj0g3v0136879.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Putative retrovirus-related pol polyprotein [Oryza sativa Japonica Group] gi\|27436748\|gb\|AAO13467.1\|	Domains G3DSA:4.10.60.10 IPR001878 PF14223 PS50158 PTHR34676 PTHR34676:SF2 SM00343 SSF57756	8
Lj0g3v0142319.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Triticum urartu] gi\|474259114\|gb\|EMS60458.1\|	Domains PF14223 PTHR34676 PTHR34676:SF2 mobidb-lite	5
Lj0g3v0165099.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	F27F5.19 [Arabidopsis thaliana] gi\|7767664\|gb\|AAF69161.1\|AC007915_13	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF2 mobidb-lite	6
Lj0g3v0189599.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-protease polyprotein [Glycine max] gi\|351721388\|ref\|NP_001235160.1\|	Domains IPR025314 PF13961 PF14223 PTHR11439	4
Lj0g3v0265659.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_024518 [Theobroma cacao] gi\|508717229\|gb\|EOY09126.1\|	Domains PF14223 PTHR34676 PTHR34676:SF2	4
Lj0g3v0289519.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein [Phaseolus vulgaris] gi\|38194910\|gb\|AAR13298.1\|	Domains Coil G3DSA:4.10.60.10 IPR001878 PF00098 PF14223 PS50158 PTHR11439 PTHR11439:SF192 SM00343 SSF57756	10
Lj0g3v0311549.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein [Glycine max] gi\|29423273\|gb\|AAO73523.1\|	Domains PF14223	2
Lj1g3v0627660.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi\|356574359\|ref\|XP_003555316.1\|	Domains PF14223	2
Lj1g3v3892220.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ty1-copia retrotransposon protein [Cucumis melo subsp]. melo] gi\|307135946\|gb\|ADN33807.1\|	Domains G3DSA:4.10.60.10 IPR001878 PF14223 PS50158 PTHR11439 PTHR11439:SF192 SM00343 SSF57756	8
Lj1g3v5035030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Contains similarity to gag proteins [Arabidopsis thaliana] gi\|2252849\|gb\|AAB62847.1\|	Domains IPR001878 PF14223 PS50158 PTHR11439 PTHR11439:SF170 mobidb-lite	6
Lj2g3v1058150.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lectin receptor kinase [Arabidopsis thaliana] gi\|1769897\|emb\|CAA69271.1\|	Domains PF14223 PTHR11439 PTHR11439:SF185	4
Lj2g3v2759030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.30.420.10 IPR012337 IPR025724 PF13976 PF14223 PTHR11439 PTHR11439:SF185 SSF53098 mobidb-lite	9
Lj2g3v3339560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi\|356574359\|ref\|XP_003555316.1\|	Domains PF14223 PTHR11439 PTHR11439:SF185	4
Lj3g3v1789100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	F27F5.19 [Arabidopsis thaliana] gi\|7767664\|gb\|AAF69161.1\|AC007915_13	Domains IPR001878 IPR029472 PF14223 PF14244 PTHR34222 SSF57756 mobidb-lite	7
Lj5g3v0104830.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable pectinesterase 55-like [Cicer arietinum] gi\|502177978\|ref\|XP_004516154.1\|	Domains PF14223	2
Lj5g3v2258230.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lectin receptor kinase [Arabidopsis thaliana] gi\|1769897\|emb\|CAA69271.1\|	Domains PF14223 PTHR11439	3
Lj6g3v1028520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao] gi\|508724739\|gb\|EOY16636.1\|	Domains PF14223 PTHR34222 PTHR34222:SF2 mobidb-lite	5
Lj6g3v1732730.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Resistance gene analog protein [Medicago truncatula] gi\|357499393\|ref\|XP_003619985.1\|	Domains PF14223	2
Lj6g3v1969170.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Inversin [Medicago truncatula] gi\|357447075\|ref\|XP_003593813.1\|	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PF14223 PTHR24177 PTHR24177:SF19 TMhelix TRANSMEMBRANE	9
LotjaGi1g1v0018900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P0ACL6\|GLCC_ECOL6 Glc operon transcriptional activator; TrEMBL-Plants: tr\|A0A151TTX5\|A0A151TTX5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0018900_LC	Domains Coil PF14223 PTHR34222 PTHR34222:SF23	5
LotjaGi1g1v0019700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0019700_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi1g1v0019700_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0019700_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0030900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0030900_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0039500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q839J4\|ADD_ENTFA Adenosine deaminase; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0039500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0039500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q84GJ9\|TRPB_NEIGO Tryptophan synthase beta chain; TrEMBL-Plants: tr\|A0A0B2QV66\|A0A0B2QV66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0039500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi1g1v0069200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00098 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	25
LotjaGi1g1v0088700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0088700_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi1g1v0090100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|P57775\|FBXW4_HUMAN F-box/WD repeat-containing protein 4; TrEMBL-Plants: tr\|A5ACP9\|A5ACP9_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0090100_LC	Domains Coil IPR036875 PF14223 PTHR35317 PTHR35317:SF10 SSF57756 mobidb-lite	7
LotjaGi1g1v0107200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A1J3EPB7\|A0A1J3EPB7_NOCCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0107200_LC	Domains IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR47592 PTHR47592:SF7 SM00343 SSF57756 mobidb-lite	10
LotjaGi1g1v0107500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0107500_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi1g1v0135900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G07540.1 Actin-binding FH2 (formin homology 2) family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A1J3CNN0\|A0A1J3CNN0_NOCCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0135900	Domains PF14223 PTHR34222 PTHR34222:SF18 mobidb-lite	5
LotjaGi1g1v0141000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0141000_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0141000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0141000_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi1g1v0141800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q13751\|LAMB3_HUMAN Laminin subunit beta-3; TrEMBL-Plants: tr\|A0A0B2QV66\|A0A0B2QV66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0141800_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi1g1v0141800_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0141800_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0146500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0146500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0146500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|A5DRJ2\|GSM1_PICGU Glucose starvation modulator protein 1; TrEMBL-Plants: tr\|U5CY72\|U5CY72_AMBTC Uncharacterized protein; Found in the gene: LotjaGi1g1v0146500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0148700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0148700_LC	Domains Coil G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34676 PTHR34676:SF4 SM00343 SSF57756 mobidb-lite	12
LotjaGi1g1v0163700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QNH5\|A0A151QNH5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0163700	Domains G3DSA:3.30.420.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF273 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	23
LotjaGi1g1v0187000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0187000_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi1g1v0197400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G48720.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q4H3K6\|FGFR_CIOIN Fibroblast growth factor receptor; TrEMBL-Plants: tr\|Q84VH6\|Q84VH6_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi1g1v0197400_LC	Domains PF14223 PTHR34676 PTHR34676:SF4 mobidb-lite	5
LotjaGi1g1v0201800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QNL0\|A0A151QNL0_CAJCA Putative transposon Ty5-1 protein YCL075W family; Found in the gene: LotjaGi1g1v0201800	Domains IPR029472 PF14223 PF14244 PTHR37610 PTHR37610:SF6 mobidb-lite	6
LotjaGi1g1v0201800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QNL0\|A0A151QNL0_CAJCA Putative transposon Ty5-1 protein YCL075W family; Found in the gene: LotjaGi1g1v0201800	Domains IPR029472 PF14223 PF14244 PTHR37610 PTHR37610:SF6 mobidb-lite	6
LotjaGi1g1v0203000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|A0QS29\|RECB_MYCS2 RecBCD enzyme subunit RecB; TrEMBL-Plants: tr\|A5AFZ5\|A5AFZ5_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0203000_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi1g1v0205800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TC71\|A0A151TC71_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0205800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 IPR036875 PF00665 PF13976 PF14223 PS50994 PTHR47481 SSF53098 SSF57756 mobidb-lite	14
LotjaGi1g1v0210200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0210200	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0217000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G16940.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0217000_LC	Domains PF14223 PTHR34676	3
LotjaGi1g1v0226600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0226600	Domains Coil G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34676 PTHR34676:SF4 SM00343 SSF57756 mobidb-lite	12
LotjaGi1g1v0238600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5BC00\|A5BC00_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0238600_LC	Domains PF14223 PTHR47481 mobidb-lite	4
LotjaGi1g1v0247700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0247700_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0247700_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0247700_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi1g1v0280700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0280700_LC	Domains IPR001878 IPR036875 PF14223 PS50158 PTHR35317 PTHR35317:SF3 SSF57756 mobidb-lite	8
LotjaGi1g1v0280700_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A0A0B2QV66\|A0A0B2QV66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0280700_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi1g1v0280700_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0280700_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0320200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0320200_LC	Domains IPR036136 PF14223 PTHR34676 PTHR34676:SF1 SSF55124	5
LotjaGi1g1v0329400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|Q65JJ2\|RASP_BACLD Zinc metalloprotease RasP; TrEMBL-Plants: tr\|A0A0B2SFD5\|A0A0B2SFD5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0329400_LC	Domains PF14223 PTHR34222 PTHR34222:SF23	4
LotjaGi1g1v0352700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G19020.1 chromomethylase 2; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151R810\|A0A151R810_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0352700_LC	Domains PF14223 PTHR34676 PTHR34676:SF5	4
LotjaGi1g1v0380200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0380200_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi1g1v0384800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151SEB7\|A0A151SEB7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0384800_LC	Domains G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34676 PTHR34676:SF1 SM00343 SSF57756 mobidb-lite	11
LotjaGi1g1v0392800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G20980.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|P25601\|YCH5_YEAST Putative transposon Ty5-1 protein YCL075W; TrEMBL-Plants: tr\|A0A151SFK6\|A0A151SFK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0392800_LC	Domains CYTOPLASMIC_DOMAIN Coil IPR036875 NON_CYTOPLASMIC_DOMAIN PF14223 PTHR34222 PTHR34222:SF23 SSF57756 TRANSMEMBRANE mobidb-lite	10
LotjaGi1g1v0409300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0409300_LC	Domains Coil PF14223 PTHR35317 PTHR35317:SF3	5
LotjaGi1g1v0409300_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0409300_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0448700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0448700_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi1g1v0464100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0464100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0464100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0464100_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0475100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151R7U6\|A0A151R7U6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0475100_LC	Domains IPR036875 PF14223 PTHR47481 SSF57756 mobidb-lite	5
LotjaGi1g1v0495100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P14733\|LMNB1_MOUSE Lamin-B1; TrEMBL-Plants: tr\|A0A151SDU3\|A0A151SDU3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0495100_LC	Domains PF14223 PTHR34222 PTHR34222:SF23	4
LotjaGi1g1v0499600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q14DL0\|UBQLN_MOUSE Ubiquilin-like protein; TrEMBL-Plants: tr\|A0A151RZ91\|A0A151RZ91_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0499600	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0501200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|Q67373\|HEMA_INBHL Hemagglutinin; TrEMBL-Plants: tr\|A0A151UAW8\|A0A151UAW8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0501200_LC	Domains IPR025314 PF13961 PF14223 PTHR35317 PTHR35317:SF6	5
LotjaGi1g1v0501200_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|Q67373\|HEMA_INBHL Hemagglutinin; TrEMBL-Plants: tr\|A0A151UAW8\|A0A151UAW8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0501200_LC	Domains IPR025314 PF13961 PF14223 PTHR35317 PTHR35317:SF6	5
LotjaGi1g1v0503100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0503100_LC	Domains IPR001878 IPR036875 PF14223 PS50158 PTHR35317 PTHR35317:SF3 SSF57756 mobidb-lite	8
LotjaGi1g1v0503100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A0A0B2QV66\|A0A0B2QV66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0503100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi1g1v0503100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0503100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0550300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QVU7\|A0A151QVU7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0550300_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi1g1v0580500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G48720.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TMN9\|A0A151TMN9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0580500_LC	Domains IPR036875 PF14223 PTHR34676 PTHR34676:SF4 SSF57756 mobidb-lite	6
LotjaGi1g1v0612800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QVU7\|A0A151QVU7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0612800_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi1g1v0615000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|P33655\|DNAG_CLOAB DNA primase; TrEMBL-Plants: tr\|A0A151TWN6\|A0A151TWN6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0615000_LC	Domains IPR025314 PF13961 PF14223 PTHR34676 PTHR34676:SF4	5
LotjaGi1g1v0623700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q9UQQ1\|NALDL_HUMAN N-acetylated-alpha-linked acidic dipeptidase-like protein; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0623700_LC	Domains PF14223 PTHR34222 PTHR34222:SF13	4
LotjaGi1g1v0625900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|Q1MP86\|CHEB_LAWIP Chemotaxis response regulator protein-glutamate methylesterase; TrEMBL-Plants: tr\|A0A151R0Z6\|A0A151R0Z6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0625900_LC	Domains IPR025314 PF13961 PF14223 PTHR35317 PTHR35317:SF6	5
LotjaGi1g1v0635200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase; TAIR: AT5G13920.1 GRF zinc finger / Zinc knuckle protein; Swiss-Prot: sp\|Q9LVP1\|TOP3A_ARATH DNA topoisomerase 3-alpha; TrEMBL-Plants: tr\|A0A0S3RM16\|A0A0S3RM16_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0635200_LC	Domains G3DSA:4.10.60.10 IPR010666 IPR036875 PF06839 PF14223 PTHR33680 PTHR33680:SF3 SSF57756 mobidb-lite	9
LotjaGi1g1v0667500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2R495\|A0A0B2R495_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0667500_LC	Domains Coil PF14223 PTHR34222 PTHR34222:SF18 mobidb-lite	6
LotjaGi1g1v0669000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|V7BRZ6\|V7BRZ6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0669000_LC	Domains PF14223 PTHR37610 PTHR37610:SF21 mobidb-lite	5
LotjaGi1g1v0669200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|A7TNL0\|MDM10_VANPO Mitochondrial distribution and morphology protein 10; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0669200_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0674500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q7TN75\|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr\|A0A0S3SX19\|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0674500	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi1g1v0688500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QUV8\|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0688500	Domains G3DSA:3.30.420.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025314 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13961 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF250 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	24
LotjaGi1g1v0723000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|V7BF82\|V7BF82_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0723000	Domains PF14223 PTHR34222 PTHR34222:SF12 mobidb-lite	5
LotjaGi1g1v0727900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0727900_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi1g1v0727900_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0727900_LC	Domains Coil PF14223 PTHR35317 PTHR35317:SF3	5
LotjaGi1g1v0754200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|B9DTE3\|PNP_STRU0 Polyribonucleotide nucleotidyltransferase; TrEMBL-Plants: tr\|A0A151SFK6\|A0A151SFK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0754200_LC	Domains Coil NON_CYTOPLASMIC_DOMAIN PF14223 PTHR34222 PTHR34222:SF23 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	11
LotjaGi1g1v0793500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RNA polymerase II transcriptional coactivator KELP; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|O65155\|KELP_ARATH RNA polymerase II transcriptional coactivator KELP; TrEMBL-Plants: tr\|A0A151TXZ1\|A0A151TXZ1_CAJCA RNA polymerase II transcriptional coactivator KELP; Found in the gene: LotjaGi1g1v0793500	Domains G3DSA:2.30.31.10 IPR001878 IPR003173 IPR009044 IPR014876 PF02229 PF08766 PF14223 PS50158 PTHR47592 PTHR47592:SF6 SSF54447 mobidb-lite	13
LotjaGi1g1v0800100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G66620.3 DA1-related protein 6; Swiss-Prot: sp\|B8NP65\|BGLF_ASPFN Probable beta-glucosidase F; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0800100_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi2g1v0022400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G48720.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q9NUQ3\|TXLNG_HUMAN Gamma-taxilin; TrEMBL-Plants: tr\|A0A151R0I3\|A0A151R0I3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0022400_LC	Domains Coil PF14223 PTHR34676 PTHR34676:SF4	5
LotjaGi2g1v0025100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|I3T3Y5\|I3T3Y5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0025100_LC	Domains PF14223 PTHR34676	3
LotjaGi2g1v0025100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|I3T3Y5\|I3T3Y5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0025100_LC	Domains PF14223 PTHR34676	3
LotjaGi2g1v0054800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5AJF5\|A5AJF5_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0054800_LC	Domains PF14223 PTHR34676 PTHR34676:SF5	4
LotjaGi2g1v0066900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|A1UUA8\|SYFA_BARBK Phenylalanine--tRNA ligase alpha subunit; TrEMBL-Plants: tr\|A0A1B5Z9U6\|A0A1B5Z9U6_TRISU Uncharacterized protein; Found in the gene: LotjaGi2g1v0066900_LC	Domains PF14223 PTHR37610 PTHR37610:SF21	4
LotjaGi2g1v0075100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RCN0\|A0A151RCN0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0075100_LC	Domains G3DSA:4.10.60.10 IPR001878 IPR025724 IPR036875 PF00098 PF13976 PF14223 PS50158 PTHR34676 PTHR34676:SF5 SM00343 SSF57756 mobidb-lite	13
LotjaGi2g1v0076500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151R7U0\|A0A151R7U0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0076500	Domains Coil G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR012337 IPR013103 IPR025314 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13961 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF264 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	24
LotjaGi2g1v0082100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0082100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0082100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q13751\|LAMB3_HUMAN Laminin subunit beta-3; TrEMBL-Plants: tr\|A0A0B2QV66\|A0A0B2QV66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0082100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi2g1v0083500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|B2RH57\|FIMC_PORG3 Major fimbrium subunit FimC; TrEMBL-Plants: tr\|A0A0S3SHM4\|A0A0S3SHM4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0083500_LC	Domains IPR036875 PF14223 PTHR34676 PTHR34676:SF4 SSF57756 mobidb-lite	6
LotjaGi2g1v0085000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0085000_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0110100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|Q9KII6\|CSD_MYCPA Probable cysteine desulfurase; TrEMBL-Plants: tr\|V9H042\|V9H042_SOYBN Gag-protease polyprotein; Found in the gene: LotjaGi2g1v0110100_LC	Domains PF14223 PTHR34676 PTHR34676:SF4 mobidb-lite	5
LotjaGi2g1v0122100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151S6M8\|A0A151S6M8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0122100	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF267 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	20
LotjaGi2g1v0127300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|Q2GUW6\|RPC3_CHAGB DNA-directed RNA polymerase III subunit RPC3; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi2g1v0127300_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi2g1v0127300_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|Q2GUW6\|RPC3_CHAGB DNA-directed RNA polymerase III subunit RPC3; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi2g1v0127300_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi2g1v0131000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RUP0\|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0131000	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi2g1v0131000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RUP0\|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0131000	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi2g1v0141900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P16654\|VSR_PVSP RNA silencing suppressor; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi2g1v0141900_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi2g1v0152300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RQY5\|A0A151RQY5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0152300_LC	Domains IPR001878 IPR025724 PF13976 PF14223 PS50158 PTHR34222 PTHR34222:SF13 mobidb-lite	8
LotjaGi2g1v0163600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0163600_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi2g1v0163600_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A0A0B2QV66\|A0A0B2QV66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0163600_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi2g1v0163600_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0163600_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0164700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|A0A151RFC2\|A0A151RFC2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0164700_LC	Domains G3DSA:4.10.60.10 IPR036875 PF14223 PTHR34676 PTHR34676:SF4 SSF57756 mobidb-lite	7
LotjaGi2g1v0166500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q9SI06\|Y5573_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g04300; TrEMBL-Plants: tr\|U5CY72\|U5CY72_AMBTC Uncharacterized protein; Found in the gene: LotjaGi2g1v0166500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0187000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TC71\|A0A151TC71_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0187000_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 IPR036875 PF00665 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF287 SSF53098 SSF57756 mobidb-lite	15
LotjaGi2g1v0189600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0A0LQV2\|A0A0A0LQV2_CUCSA Uncharacterized protein; Found in the gene: LotjaGi2g1v0189600	Domains PF14223 PTHR34676	3
LotjaGi2g1v0216300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G69910.1 Protein kinase superfamily protein; Swiss-Prot: sp\|O94628\|YGE9_SCHPO Uncharacterized methyltransferase C1347.09; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi2g1v0216300_LC	Domains Coil PF14223 PTHR34676 PTHR34676:SF4 mobidb-lite	6
LotjaGi2g1v0219800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0219800_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi2g1v0226800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0226800_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi2g1v0234100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0234100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0234100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0234100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi2g1v0249900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0249900_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0249900_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0249900_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi2g1v0264600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2R8C1\|A0A0B2R8C1_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0264600_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi2g1v0266400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0266400_LC	Domains PF14223 PTHR34676	3
LotjaGi2g1v0270500.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QRR0\|A0A151QRR0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0270500	Domains Coil PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	6
LotjaGi2g1v0275500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0275500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0275500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0275500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi2g1v0276800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|V4T614\|V4T614_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0276800_LC	Domains G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34676 SM00343 SSF57756 mobidb-lite	10
LotjaGi2g1v0302400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0302400_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0302400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0302400_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi2g1v0309800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151SGI0\|A0A151SGI0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0309800_LC	Domains IPR025724 IPR036875 PF13976 PF14223 PTHR34676 PTHR34676:SF5 SSF57756 mobidb-lite	8
LotjaGi2g1v0393200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|P34689\|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0393200_LC	Domains IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR35317 PTHR35317:SF3 SM00343 SSF57756 mobidb-lite	10
LotjaGi2g1v0395300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0395300_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi2g1v0428500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0428500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi2g1v0428500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0428500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi2g1v0454800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0454800_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi3g1v0015800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2PMZ6\|A0A0B2PMZ6_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0015800_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi3g1v0044100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U3K9\|A0A151U3K9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0044100_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi3g1v0051400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G20980.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|A0A151SFK6\|A0A151SFK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0051400_LC	Domains Coil IPR025314 IPR036875 PF13961 PF14223 PTHR35317 PTHR35317:SF6 SSF57756 mobidb-lite	9
LotjaGi3g1v0100300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q5B3C8\|NST1_EMENI Stress response protein nst1; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0100300_LC	Domains Coil NON_CYTOPLASMIC_DOMAIN PF14223 PTHR34222 PTHR34222:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM TMhelix mobidb-lite	13
LotjaGi3g1v0102700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0102700_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi3g1v0128100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0128100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi3g1v0128100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q9SI06\|Y5573_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g04300; TrEMBL-Plants: tr\|A0A0B2QV66\|A0A0B2QV66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0128100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi3g1v0211900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0211900_LC	Domains CYTOPLASMIC_DOMAIN IPR001878 IPR036875 NON_CYTOPLASMIC_DOMAIN PF14223 PS50158 PTHR35317 PTHR35317:SF3 SSF57756 TMhelix TRANSMEMBRANE	11
LotjaGi3g1v0211900_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0211900_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi3g1v0217900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0217900_LC	Domains IPR001878 IPR036875 PF14223 PS50158 PTHR35317 PTHR35317:SF3 SSF57756 mobidb-lite	8
LotjaGi3g1v0217900_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0217900_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi3g1v0222700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0222700_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi3g1v0227400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2SMV2\|A0A0B2SMV2_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0227400_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi3g1v0242400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|V7BRZ6\|V7BRZ6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0242400_LC	Domains PF14223 PTHR37610 PTHR37610:SF33 mobidb-lite	5
LotjaGi3g1v0251200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5AGE5\|A5AGE5_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0251200_LC	Domains Coil PF14223 PTHR47481 mobidb-lite	5
LotjaGi3g1v0253700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|A1RJX1\|DGTL1_SHESW Deoxyguanosinetriphosphate triphosphohydrolase-like protein; TrEMBL-Plants: tr\|A0A1B5Z9U6\|A0A1B5Z9U6_TRISU Uncharacterized protein; Found in the gene: LotjaGi3g1v0253700_LC	Domains PF14223 PTHR37610 PTHR37610:SF33	4
LotjaGi3g1v0253800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0253800_LC	Domains IPR036136 PF14223 PTHR34676 PTHR34676:SF1 SSF55124	5
LotjaGi3g1v0270200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G16280.1 RNA helicase 36; Swiss-Prot: sp\|B3R895\|RPPH_CUPTR RNA pyrophosphohydrolase; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0270200_LC	Domains PF14223 PTHR34676 PTHR34676:SF4 mobidb-lite	5
LotjaGi3g1v0277800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q864S8\|BRCA2_FELCA Breast cancer type 2 susceptibility protein homolog; TrEMBL-Plants: tr\|A0A151QSM9\|A0A151QSM9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0277800	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi3g1v0286100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|O10279\|Y019_NPVOP Uncharacterized 11.6 kDa protein; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0286100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi3g1v0286100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|O10279\|Y019_NPVOP Uncharacterized 11.6 kDa protein; TrEMBL-Plants: tr\|U5CY72\|U5CY72_AMBTC Uncharacterized protein; Found in the gene: LotjaGi3g1v0286100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi3g1v0291600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q05AK6\|ABH2B_DANRE Monoacylglycerol lipase ABHD2-B; TrEMBL-Plants: tr\|U5CY72\|U5CY72_AMBTC Uncharacterized protein; Found in the gene: LotjaGi3g1v0291600_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi3g1v0297700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0297700_LC	Domains Coil G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34676 PTHR34676:SF4 SM00343 SSF57756 mobidb-lite	12
LotjaGi3g1v0301600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G66620.2 DA1-related protein 6; Swiss-Prot: sp\|Q72PF1\|PDXH_LEPIC Pyridoxine/pyridoxamine 5'-phosphate oxidase; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0301600_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi3g1v0316500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P25601\|YCH5_YEAST Putative transposon Ty5-1 protein YCL075W; TrEMBL-Plants: tr\|A0A1B5Z9U6\|A0A1B5Z9U6_TRISU Uncharacterized protein; Found in the gene: LotjaGi3g1v0316500_LC	Domains PF14223 PTHR37610 PTHR37610:SF33 mobidb-lite	5
LotjaGi3g1v0342100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty1-copia subclass; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q1RU49\|Q1RU49_MEDTR Putative polyprotein, related; Found in the gene: LotjaGi3g1v0342100_LC	Domains PF14223 PTHR47592 PTHR47592:SF7	4
LotjaGi3g1v0343200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G15180.1 SET domain protein 2; Swiss-Prot: sp\|Q9TS45\|UTER_MACFU Uteroglobin; TrEMBL-Plants: tr\|A0A151S085\|A0A151S085_CAJCA Scarecrow-like transcription factor PAT1; Found in the gene: LotjaGi3g1v0343200_LC	Domains PF14223 PTHR35317 PTHR35317:SF6	4
LotjaGi3g1v0369600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0369600_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi3g1v0372300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0372300_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi3g1v0372300_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0372300_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi3g1v0386800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q6BUT3\|NST1_DEBHA Stress response protein NST1; TrEMBL-Plants: tr\|A0A151RE46\|A0A151RE46_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0386800	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi3g1v0517000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q75001\|GAG_HV1ET Gag polyprotein; TrEMBL-Plants: tr\|A0A151R7L7\|A0A151R7L7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0517000_LC	Domains G3DSA:4.10.60.10 IPR001878 IPR029472 IPR036875 PF14223 PF14244 PS50158 PTHR37610 PTHR37610:SF8 SM00343 SSF57756	11
LotjaGi3g1v0519100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151THK7\|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0519100	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF247 SSF53098 SSF56672 cd09272 mobidb-lite	18
LotjaGi3g1v0523400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151R0I3\|A0A151R0I3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0523400_LC	Domains Coil IPR036875 PF14223 PTHR34676 PTHR34676:SF4 SSF57756 mobidb-lite	7
LotjaGi4g1v0044200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q8VDI9\|ALG9_MOUSE Alpha-1,2-mannosyltransferase ALG9; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0044200_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PF14223 PTHR34222 PTHR34222:SF13 TRANSMEMBRANE	7
LotjaGi4g1v0045400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0045400_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi4g1v0059400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0059400_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi4g1v0061300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G62420.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp\|Q6P9L6\|KIF15_MOUSE Kinesin-like protein KIF15; TrEMBL-Plants: tr\|A0A0S3RM16\|A0A0S3RM16_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0061300	Domains PF14223 PTHR35317 PTHR35317:SF10	4
LotjaGi4g1v0071500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TAX5\|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0071500_LC	Domains Coil PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	6
LotjaGi4g1v0079400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0079400_LC	Domains IPR001878 IPR036875 PF14223 PS50158 PTHR35317 PTHR35317:SF3 SSF57756 mobidb-lite	8
LotjaGi4g1v0079400_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q49V08\|GLMU_STAS1 Bifunctional protein GlmU; TrEMBL-Plants: tr\|U5CY72\|U5CY72_AMBTC Uncharacterized protein; Found in the gene: LotjaGi4g1v0079400_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi4g1v0079400_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0079400_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi4g1v0080600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0080600	Domains PF14223 PTHR34676	3
LotjaGi4g1v0087600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0087600_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi4g1v0087600_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0087600_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi4g1v0090200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0090200_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi4g1v0104200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0D3CYK1\|A0A0D3CYK1_BRAOL Uncharacterized protein; Found in the gene: LotjaGi4g1v0104200_LC	Domains G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR35317 PTHR35317:SF10 SM00343 SSF57756 mobidb-lite	11
LotjaGi4g1v0118600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q9UPN3\|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5; TrEMBL-Plants: tr\|A0A1B5Z9U6\|A0A1B5Z9U6_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0118600	Domains PF14223 PTHR37610 PTHR37610:SF21 mobidb-lite	5
LotjaGi4g1v0150300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0150300_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi4g1v0150300_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0150300_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi4g1v0172000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0172000_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi4g1v0175700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0175700_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi4g1v0175800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0175800_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi4g1v0177800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G60650.3 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp\|P34689\|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi4g1v0177800	Domains G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34676 PTHR34676:SF4 SM00343 SSF57756 mobidb-lite	11
LotjaGi4g1v0185200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q6TDP4\|KLH17_HUMAN Kelch-like protein 17; TrEMBL-Plants: tr\|A0A151R7L7\|A0A151R7L7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0185200	Domains IPR029472 PF14223 PF14244 PTHR37610 PTHR37610:SF8	5
LotjaGi4g1v0189200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0189200_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi4g1v0198100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0R0H5G9\|A0A0R0H5G9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0198100_LC	Domains PF14223 PTHR37610 PTHR37610:SF16 mobidb-lite	5
LotjaGi4g1v0199600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q172G3\|MED1_AEDAE Mediator of RNA polymerase II transcription subunit 1; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0199600_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi4g1v0199600_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|P19137\|LAMA1_MOUSE Laminin subunit alpha-1; TrEMBL-Plants: tr\|U5CY72\|U5CY72_AMBTC Uncharacterized protein; Found in the gene: LotjaGi4g1v0199600_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi4g1v0206500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|A5E058\|PRP5_LODEL Pre-mRNA-processing ATP-dependent RNA helicase PRP5; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi4g1v0206500_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi4g1v0220200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|V7BRZ6\|V7BRZ6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0220200_LC	Domains NON_CYTOPLASMIC_DOMAIN PF14223 PTHR37610 PTHR37610:SF33 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	10
LotjaGi4g1v0264400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q84GJ9\|TRPB_NEIGO Tryptophan synthase beta chain; TrEMBL-Plants: tr\|U5CY72\|U5CY72_AMBTC Uncharacterized protein; Found in the gene: LotjaGi4g1v0264400_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi4g1v0265900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q7X9H9\|AGL93_ARATH Agamous-like MADS-box protein AGL93; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0265900_LC	Domains NON_CYTOPLASMIC_DOMAIN PF14223 PTHR34222 PTHR34222:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	10
LotjaGi4g1v0266500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TMA1\|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0266500	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi4g1v0276900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0276900_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi4g1v0291900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0291900_LC	Domains G3DSA:4.10.60.10 IPR001878 IPR025724 IPR036875 PF00098 PF13976 PF14223 PS50158 PTHR34676 PTHR34676:SF1 SM00343 SSF57756 mobidb-lite	13
LotjaGi4g1v0300000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|C1FLB3\|PYRF_CLOBJ Orotidine 5'-phosphate decarboxylase; TrEMBL-Plants: tr\|A0A0J8BL66\|A0A0J8BL66_BETVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0300000	Domains PF14223 PTHR35317 PTHR35317:SF4	4
LotjaGi4g1v0331100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P0CG32\|ZCC18_HUMAN Zinc finger CCHC domain-containing protein 18; TrEMBL-Plants: tr\|A0A151TMA1\|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0331100	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi4g1v0394400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q8IZF0\|NALCN_HUMAN Sodium leak channel non-selective protein; TrEMBL-Plants: tr\|A0A1B5Z9U6\|A0A1B5Z9U6_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0394400	Domains PF14223 PTHR37610 PTHR37610:SF21 mobidb-lite	5
LotjaGi4g1v0424300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QVU7\|A0A151QVU7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0424300_LC	Domains PF14223 PTHR34676 PTHR34676:SF1 mobidb-lite	5
LotjaGi4g1v0427800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|Q5HNG0\|DAAA_STAEQ D-alanine aminotransferase; TrEMBL-Plants: tr\|A0A151SFK6\|A0A151SFK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0427800_LC	Domains Coil PF14223 PTHR34222 PTHR34222:SF23 mobidb-lite	6
LotjaGi4g1v0431600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RJN4\|A0A151RJN4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0431600_LC	Domains PF14223 PTHR34676 mobidb-lite	4
LotjaGi4g1v0431600_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RJN4\|A0A151RJN4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0431600_LC	Domains PF14223 PTHR34676 mobidb-lite	4
LotjaGi4g1v0431600_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RJN4\|A0A151RJN4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0431600_LC	Domains PF14223 PTHR34676 mobidb-lite	4
LotjaGi4g1v0446500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0446500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi4g1v0446500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0446500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi5g1v0007300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|V7BRZ6\|V7BRZ6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0007300_LC	Domains PF14223 PTHR37610 PTHR37610:SF33 mobidb-lite	5
LotjaGi5g1v0009800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P34689\|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi5g1v0009800	Domains Coil G3DSA:4.10.60.10 IPR036875 PF14223 PTHR34676 PTHR34676:SF4 SSF57756 mobidb-lite	8
LotjaGi5g1v0014900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q7WY67\|GERT_BACSU Spore germination protein GerT; TrEMBL-Plants: tr\|A0A0B2S9Q5\|A0A0B2S9Q5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0014900_LC	Domains PF14223 PTHR37610 PTHR37610:SF33 mobidb-lite	5
LotjaGi5g1v0044900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|O76743\|GLH4_CAEEL ATP-dependent RNA helicase glh-4; TrEMBL-Plants: tr\|A0A151TMA1\|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0044900_LC	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi5g1v0046700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q7TN75\|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr\|A0A0S3SX19\|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0046700	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi5g1v0056500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|A8F3R6\|SYS_PSELT Serine--tRNA ligase; TrEMBL-Plants: tr\|A0A0S3SX19\|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0056500	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi5g1v0088900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0088900_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi5g1v0100900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|O51578\|RECB_BORBU RecBCD enzyme subunit RecB; TrEMBL-Plants: tr\|O65147\|O65147_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi5g1v0100900_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi5g1v0101100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G04480.1 endoribonuclease; Swiss-Prot: sp\|A2SD39\|RPPH_METPP RNA pyrophosphohydrolase; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi5g1v0101100_LC	Domains Coil PF14223 PTHR34676 PTHR34676:SF4	5
LotjaGi5g1v0103300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151THK7\|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0103300_LC	Domains PF14223 PTHR37610 PTHR37610:SF33 mobidb-lite	5
LotjaGi5g1v0105500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0105500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi5g1v0105500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0105500_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi5g1v0109400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|V7BRZ6\|V7BRZ6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0109400	Domains PF14223 PTHR37610 PTHR37610:SF33 mobidb-lite	5
LotjaGi5g1v0116200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151S4H3\|A0A151S4H3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0116200	Domains PF14223 PTHR34222 PTHR34222:SF5 mobidb-lite	5
LotjaGi5g1v0116200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151S4H3\|A0A151S4H3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0116200	Domains PF14223 PTHR34222 PTHR34222:SF5 mobidb-lite	5
LotjaGi5g1v0116200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151S4H3\|A0A151S4H3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0116200	Domains PF14223 PTHR34222 PTHR34222:SF5 mobidb-lite	5
LotjaGi5g1v0116200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151S4H3\|A0A151S4H3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0116200	Domains PF14223 PTHR34222 PTHR34222:SF5 mobidb-lite	5
LotjaGi5g1v0120000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0120000	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi5g1v0120500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U9A5\|A0A151U9A5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0120500	Domains IPR029472 IPR036875 PF14223 PF14244 PTHR37610 PTHR37610:SF25 SSF57756 mobidb-lite	8
LotjaGi5g1v0121000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G48720.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q8A861\|AEEP_BACTN L-Ala-D/L-Glu epimerase; TrEMBL-Plants: tr\|Q84VH6\|Q84VH6_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi5g1v0121000_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi5g1v0125400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT2G06904.1 nucleic acid / zinc ion binding protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi5g1v0125400	Domains Coil G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34676 PTHR34676:SF4 SM00343 SSF57756 mobidb-lite	12
LotjaGi5g1v0143200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2SN80\|A0A0B2SN80_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0143200_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi5g1v0146200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TAX5\|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0146200_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	18
LotjaGi5g1v0150200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0150200_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi5g1v0156200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RF21\|A0A151RF21_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0156200_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi5g1v0161300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0161300_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi5g1v0161300_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0161300_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi5g1v0164500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U4X0\|A0A151U4X0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0164500	Domains PF14223 PTHR34222 PTHR34222:SF21 mobidb-lite	5
LotjaGi5g1v0164500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U4X0\|A0A151U4X0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0164500	Domains PF14223 PTHR34222 PTHR34222:SF21 mobidb-lite	5
LotjaGi5g1v0164500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U4X0\|A0A151U4X0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0164500	Domains PF14223 PTHR34222 PTHR34222:SF21 mobidb-lite	5
LotjaGi5g1v0171300.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5AVD6\|A5AVD6_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0171300	Domains G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34222 PTHR34222:SF15 SM00343 SSF57756 mobidb-lite	11
LotjaGi5g1v0171300.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A061EH95\|A0A061EH95_THECC Uncharacterized protein; Found in the gene: LotjaGi5g1v0171300	Domains G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34222 PTHR34222:SF15 SM00343 SSF57756 mobidb-lite	11
LotjaGi5g1v0171700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151THK7\|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0171700_LC	Domains IPR025724 PF13976 PF14223 PTHR37610 PTHR37610:SF33 mobidb-lite	6
LotjaGi5g1v0192000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G35820.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A1D6ADH2\|A0A1D6ADH2_WHEAT Uncharacterized protein; Found in the gene: LotjaGi5g1v0192000_LC	Domains PF14223 PTHR34676	3
LotjaGi5g1v0234200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q05AK6\|ABH2B_DANRE Monoacylglycerol lipase ABHD2-B; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0234200_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi5g1v0265600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151UBW1\|A0A151UBW1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0265600_LC	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR025724 IPR036397 IPR036875 PF00098 PF00665 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF57756 mobidb-lite	20
LotjaGi5g1v0296100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|A0A151RE46\|A0A151RE46_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0296100	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6
LotjaGi5g1v0321200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|O12158\|POL_HV192 Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151SZ39\|A0A151SZ39_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0321200_LC	Domains G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34222 PTHR34222:SF2 SM00343 SSF57756	10
LotjaGi5g1v0334300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G48720.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TMN9\|A0A151TMN9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0334300_LC	Domains Coil G3DSA:4.10.60.10 IPR001878 IPR025314 IPR036875 PF00098 PF13961 PF14223 PS50158 PTHR34676 PTHR34676:SF4 SM00343 SSF57756 mobidb-lite	14
LotjaGi5g1v0337800_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|A6PWD2\|FHAD1_MOUSE Forkhead-associated domain-containing protein 1; TrEMBL-Plants: tr\|V7BRZ6\|V7BRZ6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0337800_LC	Domains PF14223 PTHR37610 PTHR37610:SF21 mobidb-lite	5
LotjaGi5g1v0349300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q17LW0\|MYO7A_AEDAE Myosin-VIIa; TrEMBL-Plants: tr\|A0A1J3EAM3\|A0A1J3EAM3_NOCCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0349300	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi6g1v0015200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A061EH95\|A0A061EH95_THECC Uncharacterized protein; Found in the gene: LotjaGi6g1v0015200	Domains G3DSA:4.10.60.10 IPR001878 IPR036875 PF00098 PF14223 PS50158 PTHR34222 PTHR34222:SF15 SM00343 SSF57756 mobidb-lite	11
LotjaGi6g1v0037400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0037400	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00098 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	25
LotjaGi6g1v0083000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RME6\|A0A151RME6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0083000_LC	Domains IPR036875 PF14223 PTHR47481 SSF57756 mobidb-lite	5
LotjaGi6g1v0096400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|V7BRZ6\|V7BRZ6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0096400_LC	Domains PF14223 PTHR37610 PTHR37610:SF33 mobidb-lite	5
LotjaGi6g1v0104100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151R377\|A0A151R377_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0104100_LC	Domains PF14223 PTHR34676 PTHR34676:SF1	4
LotjaGi6g1v0111800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|Q5R9C2\|S6A15_PONAB Sodium-dependent neutral amino acid transporter B(0)AT2; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi6g1v0111800_LC	Domains PF14223 PTHR34676 PTHR34676:SF4	4
LotjaGi6g1v0133800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RAD3\|A0A151RAD3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0133800	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR029472 IPR036397 IPR043502 PF00665 PF07727 PF13976 PF14223 PF14244 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	20
LotjaGi6g1v0152700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0152700_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi6g1v0152700_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0152700_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi6g1v0161400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0161400_LC	Domains IPR001878 IPR036875 PF14223 PS50158 PTHR35317 PTHR35317:SF3 SSF57756 mobidb-lite	8
LotjaGi6g1v0161400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0161400_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi6g1v0165000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2R495\|A0A0B2R495_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0165000_LC	Domains Coil IPR001878 IPR036875 PF14223 PS50158 PTHR34222 PTHR34222:SF18 SM00343 SSF57756 mobidb-lite	10
LotjaGi6g1v0166100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P0CP47\|PABP_CRYNB Polyadenylate-binding protein, cytoplasmic and nuclear; TrEMBL-Plants: tr\|A0A151QRR0\|A0A151QRR0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0166100	Domains Coil PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	6
LotjaGi6g1v0171900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G48720.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|F3Y5P4\|GRDN_CAEEL Girdin homolog; TrEMBL-Plants: tr\|A0A0B2QRG5\|A0A0B2QRG5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0171900_LC	Domains IPR025314 PF13961 PF14223 PTHR34676 PTHR34676:SF4	5
LotjaGi6g1v0179100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0179100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi6g1v0179100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|E0Y420\|VSP3_MACLB Serine protease VLSP-3; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0179100_LC	Domains PF14223 PTHR35317 PTHR35317:SF3	4
LotjaGi6g1v0187000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5AGK3\|A5AGK3_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0187000	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR029472 IPR036397 IPR036875 IPR043502 PF00098 PF00665 PF07727 PF13976 PF14223 PF14244 PS50158 PS50994 PTHR11439 PTHR11439:SF273 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	27
LotjaGi6g1v0199700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TMN9\|A0A151TMN9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0199700	Domains G3DSA:3.30.420.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF273 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	23
LotjaGi6g1v0199900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2QIT1\|A0A0B2QIT1_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0199900	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00665 PF07727 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF247 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SSF56672 cd09272 mobidb-lite	23
LotjaGi6g1v0215400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G48720.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q9LUS3\|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610; TrEMBL-Plants: tr\|A0A0B2SJS8\|A0A0B2SJS8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0215400_LC	Domains PF14223 PTHR37610 PTHR37610:SF26 mobidb-lite	5
LotjaGi6g1v0221400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q966L9\|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr\|A5BKR0\|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0221400_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi6g1v0221400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp\|Q172G3\|MED1_AEDAE Mediator of RNA polymerase II transcription subunit 1; TrEMBL-Plants: tr\|U5CY72\|U5CY72_AMBTC Uncharacterized protein; Found in the gene: LotjaGi6g1v0221400_LC	Domains PF14223 PTHR35317 PTHR35317:SF3 mobidb-lite	5
LotjaGi6g1v0272400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q5ZL57\|COPD_CHICK Coatomer subunit delta; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0272400_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi6g1v0319400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp\|Q28CN3\|UBP33_XENTR Ubiquitin carboxyl-terminal hydrolase 33; TrEMBL-Plants: tr\|A0A151UAW8\|A0A151UAW8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0319400_LC	Domains Coil IPR025314 PF13961 PF14223 PTHR35317 PTHR35317:SF6	6
LotjaGi6g1v0321000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P0CG32\|ZCC18_HUMAN Zinc finger CCHC domain-containing protein 18; TrEMBL-Plants: tr\|A0A151TMA1\|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0321000	Domains IPR029472 PF14223 PF14244 PTHR34222 PTHR34222:SF5 mobidb-lite	6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	0.34