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PF13976

Source: Pfam

Description

GAG-pre-integrase domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 79

Transcript Name Description Predicted domains Domain count
Lj0g3v0035939.1
– Integrase, catalytic region [Medicago truncatula] gi|87240899|gb|ABD32757.1|
Domains
4
Lj0g3v0104789.1
–
Domains
10
Lj0g3v0164619.1
– PREDICTED: N-carbamoylputrescine amidase-like [Cicer arietinum] gi|502083535|ref|XP_004487489.1|
Domains
12
Lj0g3v0280949.1
– Copia-like protein [Brassica oleracea] gi|171921100|gb|ACB59199.1|
Domains
2
Lj0g3v0346709.1
– Benzoyl coenzyme A benzyl alcohol benzoyl transferase [Medicago truncatula] gi|357512201|ref|XP_003626389.1|
Domains
4
Lj0g3v0346719.1
– Retroelement pol polyprotein-like [Arabidopsis thaliana] gi|10177143|dbj|BAB10503.1|
Domains
8
Lj2g3v0609610.1
– Strong similarity to gi|3600044 T12H20.12 protease homolog from Arabidopsis thaliana BAC gb|AF080119 and is a member of the reverse transcriptase family PF|00078 [Arabidopsis thaliana] gi|4512618|gb|AAD21687.1|
Domains
10
Lj2g3v1203350.1
– Retroelement pol polyprotein-like [Arabidopsis thaliana] gi|10177558|dbj|BAB10837.1|
Domains
15
Lj2g3v2759030.1
–
Domains
9
Lj2g3v3323890.1
– Retroelement pol polyprotein-like [Arabidopsis thaliana] gi|10177143|dbj|BAB10503.1|
Domains
20
Lj4g3v0486260.1
– Gag-pol polyprotein [Glycine max] gi|29423282|gb|AAO73529.1|
Domains
7
Lj5g3v0746870.1
– Retrovirus-related like polyprotein [Arabidopsis thaliana] gi|2244802|emb|CAB10225.1|
Domains
11
Lj5g3v2244650.1
– F6N18.1 [Arabidopsis thaliana] gi|12039053|gb|AAF25964.2|AC017118_1
Domains
4
LotjaGi1g1v0069200.1
– Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200
Domains
25
LotjaGi1g1v0107400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TNK0|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0107400_LC
Domains
11
LotjaGi1g1v0163700.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QNH5|A0A151QNH5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0163700
Domains
23
LotjaGi1g1v0192700_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P93293|M300_ARATH Uncharacterized mitochondrial protein AtMg00300; TrEMBL-Plants: tr|A0A151ST23|A0A151ST23_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0192700_LC
Domains
2
LotjaGi1g1v0205800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TC71|A0A151TC71_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0205800_LC
Domains
14
LotjaGi1g1v0280800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5BE46|A5BE46_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0280800_LC
Domains
2
LotjaGi1g1v0515600_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0515600_LC
Domains
11
LotjaGi1g1v0688500.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QUV8|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0688500
Domains
24
LotjaGi1g1v0710000_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RWA1|A0A151RWA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0710000_LC
Domains
2
LotjaGi2g1v0015200_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2QD49|A0A0B2QD49_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0015200_LC
Domains
17
LotjaGi2g1v0075100_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RCN0|A0A151RCN0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0075100_LC
Domains
13
LotjaGi2g1v0076500.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151R7U0|A0A151R7U0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0076500
Domains
24
LotjaGi2g1v0095500_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TVZ8|A0A151TVZ8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0095500_LC
Domains
2
LotjaGi2g1v0114500_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151T1N1|A0A151T1N1_CAJCA Copia protein; Found in the gene: LotjaGi2g1v0114500_LC
Domains
4
LotjaGi2g1v0122100.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151S6M8|A0A151S6M8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0122100
Domains
20
LotjaGi2g1v0152300_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RQY5|A0A151RQY5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0152300_LC
Domains
8
LotjaGi2g1v0153000_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q84VH6|Q84VH6_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi2g1v0153000_LC
Domains
8
LotjaGi2g1v0187000_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TC71|A0A151TC71_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0187000_LC
Domains
15
LotjaGi2g1v0203400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G63070.1 Tudor/PWWP/MBT domain-containing protein; Swiss-Prot: sp|F4IZM8|HUAL3_ARATH Protein HUA2-LIKE 3; TrEMBL-Plants: tr|A0A151TEC5|A0A151TEC5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0203400_LC
Domains
2
LotjaGi2g1v0228900_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RFC2|A0A151RFC2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0228900_LC
Domains
11
LotjaGi2g1v0243900_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G20980.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|Q0VND7|RLMN_ALCBS Dual-specificity RNA methyltransferase RlmN; TrEMBL-Plants: tr|A0A151RMJ4|A0A151RMJ4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0243900_LC
Domains
2
LotjaGi2g1v0275100_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SZR9|A0A151SZR9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0275100_LC
Domains
18
LotjaGi2g1v0285400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SEK6|A0A151SEK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0285400_LC
Domains
12
LotjaGi2g1v0290200_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151S5K7|A0A151S5K7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0290200_LC
Domains
8
LotjaGi2g1v0309800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SGI0|A0A151SGI0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0309800_LC
Domains
8
LotjaGi2g1v0395400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TNK0|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0395400_LC
Domains
8
LotjaGi3g1v0006300_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A5B902|A5B902_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0006300_LC
Domains
4
LotjaGi3g1v0006300_LC.2
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A5B902|A5B902_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0006300_LC
Domains
4
LotjaGi3g1v0006300_LC.3
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A5B902|A5B902_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0006300_LC
Domains
4
LotjaGi3g1v0037000_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P93293|M300_ARATH Uncharacterized mitochondrial protein AtMg00300; TrEMBL-Plants: tr|A0A151S5K7|A0A151S5K7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0037000_LC
Domains
4
LotjaGi3g1v0067100.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RJ01|A0A151RJ01_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0067100
Domains
23
LotjaGi3g1v0072400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U6I4|A0A151U6I4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0072400_LC
Domains
21
LotjaGi3g1v0072400_LC.2
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U6I4|A0A151U6I4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0072400_LC
Domains
21
LotjaGi3g1v0145700_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151UAT2|A0A151UAT2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0145700_LC
Domains
11
LotjaGi3g1v0297700_LC.2
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0297700_LC
Domains
4
LotjaGi3g1v0391000_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G61440.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|Q6L2D8|PDXS_PICTO Pyridoxal 5'-phosphate synthase subunit PdxS; TrEMBL-Plants: tr|A0A151TNK9|A0A151TNK9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0391000_LC
Domains
2
LotjaGi3g1v0517000_LC.2
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U0F7|A0A151U0F7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0517000_LC
Domains
17
LotjaGi3g1v0519100.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151THK7|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0519100
Domains
18
LotjaGi4g1v0033100_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0033100_LC
Domains
11
LotjaGi4g1v0122500_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TAX5|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0122500_LC
Domains
13
LotjaGi4g1v0190800_LC.2
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TAX5|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0190800_LC
Domains
15
LotjaGi4g1v0190800_LC.3
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RUP0|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0190800_LC
Domains
14
LotjaGi4g1v0211100_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi4g1v0211100_LC
Domains
11
LotjaGi4g1v0291900_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0291900_LC
Domains
13
LotjaGi4g1v0313200.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2P7I4|A0A0B2P7I4_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0313200
Domains
21
LotjaGi4g1v0347500_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TNK0|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0347500_LC
Domains
11
LotjaGi4g1v0401700_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT2G03810.1 18S pre-ribosomal assembly protein gar2-like protein; Swiss-Prot: sp|P06179|FLIC_SALTY Flagellin; TrEMBL-Plants: tr|A0A151RFL2|A0A151RFL2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0401700_LC
Domains
2
LotjaGi5g1v0100800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G05360.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|Q84VH6|Q84VH6_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi5g1v0100800_LC
Domains
17
LotjaGi5g1v0146200_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TAX5|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0146200_LC
Domains
18
LotjaGi5g1v0171700_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151THK7|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0171700_LC
Domains
6
LotjaGi5g1v0265600_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151UBW1|A0A151UBW1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0265600_LC
Domains
20
LotjaGi5g1v0337800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P93293|M300_ARATH Uncharacterized mitochondrial protein AtMg00300; TrEMBL-Plants: tr|A0A151TAR7|A0A151TAR7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0337800_LC
Domains
2
LotjaGi6g1v0030200_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT2G15530.1 RING/U-box superfamily protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RJ01|A0A151RJ01_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0030200_LC
Domains
2
LotjaGi6g1v0037400.1
– Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0037400
Domains
25
LotjaGi6g1v0060200_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TYT3|A0A151TYT3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0060200_LC
Domains
2
LotjaGi6g1v0073900_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RIL1|A0A151RIL1_CAJCA Copia protein; Found in the gene: LotjaGi6g1v0073900_LC
Domains
19
LotjaGi6g1v0073900_LC.2
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A151RIL1|A0A151RIL1_CAJCA Copia protein; Found in the gene: LotjaGi6g1v0073900_LC
Domains
15
LotjaGi6g1v0083000_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U108|A0A151U108_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0083000_LC
Domains
14
LotjaGi6g1v0100600_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RUP0|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0100600_LC
Domains
17
LotjaGi6g1v0127800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2P7I4|A0A0B2P7I4_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0127800_LC
Domains
11
LotjaGi6g1v0133800.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RAD3|A0A151RAD3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0133800
Domains
20
LotjaGi6g1v0172000_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G20980.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A151QSA1|A0A151QSA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0172000_LC
Domains
4
LotjaGi6g1v0187000.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5AGK3|A5AGK3_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0187000
Domains
27
LotjaGi6g1v0199700.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TMN9|A0A151TMN9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0199700
Domains
23
LotjaGi6g1v0199900.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2QIT1|A0A0B2QIT1_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0199900
Domains
23
LotjaGi6g1v0272400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151T2P7|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0272400_LC
Domains
22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 1.27