Domain Predictions — View

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PF00665

Source: Pfam

Description

Integrase core domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0015074 View details of GO:0015074 AmiGO InterPro QuickGO	Biological process	DNA integration	The process in which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome.	Subterm of GO:0006259

Associated Lotus transcripts 298

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0080519.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Polyprotein [Primula vulgaris] gi\|89887350\|gb\|ABD78329.1\|	Domains Coil G3DSA:3.30.420.10 IPR001584 IPR012337 PF00665 PS50994 PTHR24559 PTHR24559:SF186 SSF53098	9
Lj0g3v0104789.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF185 SSF53098	10
Lj0g3v0118989.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.30.420.10 IPR001584 IPR012337 PF00665 PTHR11439 PTHR11439:SF185 SSF53098	7
Lj0g3v0123829.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related like polyprotein [Arabidopsis thaliana] gi\|2244802\|emb\|CAB10225.1\|	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 PF00665 PS50994 PTHR11439 PTHR11439:SF185 SSF53098 mobidb-lite	9
Lj0g3v0255189.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_029495 [Theobroma cacao] gi\|508780457\|gb\|EOY27713.1\|	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 PF00665 PS50994 PTHR11439 PTHR11439:SF192 SSF53098	8
Lj2g3v0609610.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Strong similarity to gi\|3600044 T12H20.12 protease homolog from Arabidopsis thaliana BAC gb\|AF080119 and is a member of the reverse transcriptase family PF\|00078 [Arabidopsis thaliana] gi\|4512618\|gb\|AAD21687.1\|	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF185 SSF53098	10
Lj2g3v1203350.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retroelement pol polyprotein-like [Arabidopsis thaliana] gi\|10177558\|dbj\|BAB10837.1\|	Domains G3DSA:3.30.420.10 IPR001584 IPR005162 IPR012337 IPR013103 IPR025724 PF00665 PF03732 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF185 SSF53098 mobidb-lite	15
Lj2g3v3323890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retroelement pol polyprotein-like [Arabidopsis thaliana] gi\|10177143\|dbj\|BAB10503.1\|	Domains G3DSA:3.30.420.10 IPR001584 IPR001878 IPR005162 IPR012337 IPR025724 NON_CYTOPLASMIC_DOMAIN PF00665 PF03732 PF13976 PS50994 PTHR11439 PTHR11439:SF185 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SSF57756 SignalP-noTM_EUK	20
Lj5g3v0746870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related like polyprotein [Arabidopsis thaliana] gi\|2244802\|emb\|CAB10225.1\|	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF185 SSF53098 mobidb-lite	11
LotjaGi0g1v0002600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi0g1v0002700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi0g1v0002800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0048500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W0\|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	39
LotjaGi1g1v0048500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W0\|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	39
LotjaGi1g1v0069200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00098 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	25
LotjaGi1g1v0097700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TIH6\|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0097700_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	9
LotjaGi1g1v0100200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gypsy/Ty3 element polyprotein, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W1\|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0100200_LC	Domains G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000953 IPR001584 IPR012337 IPR016197 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00665 PF17917 PF17921 PS50013 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF54160 SSF56672 cd09274 cd17785 cd18979	26
LotjaGi1g1v0107400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TNK0\|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0107400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	11
LotjaGi1g1v0153800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0153800_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi1g1v0163700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QNH5\|A0A151QNH5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0163700	Domains G3DSA:3.30.420.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF273 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	23
LotjaGi1g1v0168900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P23074\|POL_SFV1 Pro-Pol polyprotein; TrEMBL-Plants: tr\|A0A151U9S6\|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0168900_LC	Domains G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR002156 IPR012337 IPR036397 IPR041588 PF00665 PF13456 PF17921 PS50879 PS50994 PTHR46387 PTHR46387:SF4 SSF53098 cd09279	16
LotjaGi1g1v0205800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TC71\|A0A151TC71_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0205800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 IPR036875 PF00665 PF13976 PF14223 PS50994 PTHR47481 SSF53098 SSF57756 mobidb-lite	14
LotjaGi1g1v0218200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0218200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0222000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0222000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0223500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0223500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0224800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0224800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0225500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0225600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0225700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0225800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0226200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0226200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0226500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0226500_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	9
LotjaGi1g1v0229200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0229200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0229300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A1B5Z8G7\|A0A1B5Z8G7_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0229300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi1g1v0229600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT2G42580.1 tetratricopetide-repeat thioredoxin-like 3; Swiss-Prot: sp\|P0CT41\|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr\|A0A151UHI6\|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi1g1v0229600_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00665 PF17917 PF17921 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF56672 cd09274	21
LotjaGi1g1v0243000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0243000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi1g1v0255700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q9C739\|Q9C739_ARATH Copia-type polyprotein, putative; Found in the gene: LotjaGi1g1v0255700_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 NON_CYTOPLASMIC_DOMAIN PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 TRANSMEMBRANE	12
LotjaGi1g1v0268800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G39960.1 Molecular chaperone Hsp40/DnaJ family protein; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HT49\|Q2HT49_MEDTR Integrase, catalytic region; Found in the gene: LotjaGi1g1v0268800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF250 SSF53098	9
LotjaGi1g1v0269400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A061GA43\|A0A061GA43_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi1g1v0269400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR016197 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF54160 cd18659	12
LotjaGi1g1v0269400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A061GA43\|A0A061GA43_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi1g1v0269400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR016197 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF54160 cd18659 mobidb-lite	13
LotjaGi1g1v0269400_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A061GA43\|A0A061GA43_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi1g1v0269400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR016197 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF54160 cd18659	12
LotjaGi1g1v0306200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT1G05810.1 Rab GTPase-like A5A protein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151S7F9\|A0A151S7F9_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0306200_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF13 SSF53098	9
LotjaGi1g1v0311100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0311100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.50.40 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR001969 IPR005162 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF03732 PF13975 PF17919 PF17921 PS00141 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	42
LotjaGi1g1v0377900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TJC6\|A0A151TJC6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0377900_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR036397 IPR043502 PF00665 PF07727 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672	13
LotjaGi1g1v0384600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RCT9\|A0A151RCT9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0384600_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 mobidb-lite	10
LotjaGi1g1v0419400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT4G32910.1 nuclear pore complex Nup85-like protein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|Q3C0I2\|Q3C0I2_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0419400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR24559 PTHR24559:SF294 SSF53098	11
LotjaGi1g1v0494800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151RSW7\|A0A151RSW7_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0494800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR016197 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF294 SSF53098 SSF54160 cd18979	12
LotjaGi1g1v0515600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0515600_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF250 SSF53098	11
LotjaGi1g1v0521400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151REJ2\|A0A151REJ2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0521400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR036397 IPR043502 PF00665 PF07727 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 SSF56672 mobidb-lite	14
LotjaGi1g1v0548500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp\|P0CT41\|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr\|A0A151SC61\|A0A151SC61_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0548500_LC	Domains G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 IPR001584 IPR002156 IPR012337 IPR036397 IPR041373 IPR041588 IPR043502 PF00665 PF13456 PF17917 PF17921 PS50879 PS50994 PTHR24559 PTHR24559:SF275 SSF53098 SSF56672 cd09279	21
LotjaGi1g1v0622800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0622800_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF03732 PF08284 PF17919 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi1g1v0688500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QUV8\|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0688500	Domains G3DSA:3.30.420.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025314 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13961 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF250 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	24
LotjaGi2g1v0015200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2QD49\|A0A0B2QD49_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0015200_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	17
LotjaGi2g1v0023400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G61400.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp\|P0CT34\|TF21_SCHPO Transposon Tf2-1 polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0023400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF290 SSF53098	9
LotjaGi2g1v0076500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151R7U0\|A0A151R7U0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0076500	Domains Coil G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR012337 IPR013103 IPR025314 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13961 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF264 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	24
LotjaGi2g1v0078000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A061GA43\|A0A061GA43_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi2g1v0078000_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR016197 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF54160 cd18659	12
LotjaGi2g1v0078000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A061GA43\|A0A061GA43_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi2g1v0078000_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR016197 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF54160 cd18659 mobidb-lite	13
LotjaGi2g1v0078500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT5G07670.1 RNI-like superfamily protein; Swiss-Prot: sp\|P0CT41\|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0078500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.50.40 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR001584 IPR012337 IPR016197 IPR023780 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00385 PF00665 PF17917 PF17921 PS50994 PTHR24559 PTHR24559:SF294 SSF53098 SSF54160 SSF56672 cd09274 cd18979	27
LotjaGi2g1v0089100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|Q84ZV5\|Q84ZV5_SOYBN Polyprotein; Found in the gene: LotjaGi2g1v0089100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF294 SSF53098	9
LotjaGi2g1v0090800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0090800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0091500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0091500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0094200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0094200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0101900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0101900	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi2g1v0102500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151UHI6\|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi2g1v0102500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR001584 IPR012337 IPR036397 IPR041588 IPR043128 PF00665 PF17921 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	16
LotjaGi2g1v0108000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0108100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0108400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UF56\|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0108400_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi2g1v0108500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0108700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0108900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0108900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0109100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0109100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0110000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0110000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0112300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0112300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0112500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0112500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0113200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A0L9V4A1\|A0A0L9V4A1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0113200_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF03732 PF08284 PF17919 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi2g1v0113600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0113600	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274 mobidb-lite	23
LotjaGi2g1v0116300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0116300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	43
LotjaGi2g1v0122100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151S6M8\|A0A151S6M8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0122100	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF267 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	20
LotjaGi2g1v0164100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00750.1 GAG/POL/ENV polyprotein (ChrM); Swiss-Prot: sp\|P23074\|POL_SFV1 Pro-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QYB1\|A0A151QYB1_CAJCA Gypsy retrotransposon integrase-like protein 1; Found in the gene: LotjaGi2g1v0164100_LC	Domains G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	12
LotjaGi2g1v0187000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TC71\|A0A151TC71_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0187000_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 IPR036875 PF00665 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF287 SSF53098 SSF57756 mobidb-lite	15
LotjaGi2g1v0208700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp\|P23074\|POL_SFV1 Pro-Pol polyprotein; TrEMBL-Plants: tr\|A0A151U9S6\|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0208700_LC	Domains G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 IPR001584 IPR002156 IPR012337 IPR036397 IPR041373 IPR041588 IPR043502 PF00665 PF13456 PF17917 PF17921 PS50879 PS50994 PTHR46387 PTHR46387:SF4 SSF53098 SSF56672 cd09279	21
LotjaGi2g1v0228900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RFC2\|A0A151RFC2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0228900_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF250 SSF53098	11
LotjaGi2g1v0275100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151SZR9\|A0A151SZR9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0275100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 SSF56672 SSF57756 mobidb-lite	18
LotjaGi2g1v0285400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151SEK6\|A0A151SEK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0285400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF247 SSF53098 mobidb-lite	12
LotjaGi2g1v0325800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151T6G8\|A0A151T6G8_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0325800_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR001584 IPR002156 IPR012337 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00665 PF13456 PF17919 PF17921 PS50879 PS50994 PTHR24559 PTHR24559:SF275 SSF53098 SSF56672 cd09279	24
LotjaGi2g1v0357900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi2g1v0357900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi2g1v0358000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UH18\|A0A151UH18_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0358000_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi2g1v0411100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT1G31080.1 F-box family protein; Swiss-Prot: sp\|Q9NXP7\|GIN1_HUMAN Gypsy retrotransposon integrase-like protein 1; TrEMBL-Plants: tr\|A0A151SC61\|A0A151SC61_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0411100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	9
LotjaGi3g1v0033800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT3G55850.1 Amidohydrolase family; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151U9S6\|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0033800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	9
LotjaGi3g1v0067100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RJ01\|A0A151RJ01_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0067100	Domains G3DSA:3.30.420.10 IPR001584 IPR001878 IPR005162 IPR012337 IPR013103 IPR025724 IPR029472 IPR036397 IPR043502 PF00665 PF03732 PF07727 PF13976 PF14244 PS50158 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	23
LotjaGi3g1v0072400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U6I4\|A0A151U6I4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0072400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF265 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SSF56672 mobidb-lite	21
LotjaGi3g1v0072400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U6I4\|A0A151U6I4_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0072400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF265 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SSF56672 mobidb-lite	21
LotjaGi3g1v0093200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0093200_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF284 SSF53098	9
LotjaGi3g1v0145700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151UAT2\|A0A151UAT2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0145700_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF250 SSF53098	11
LotjaGi3g1v0167800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9V8\|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0167800_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF03732 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	39
LotjaGi3g1v0216600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT2G35040.1 AICARFT/IMPCHase bienzyme family protein; Swiss-Prot: sp\|P21414\|POL_GALV Pol polyprotein; TrEMBL-Plants: tr\|A0A0J8B800\|A0A0J8B800_BETVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0216600_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	9
LotjaGi3g1v0238300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi3g1v0238300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17919 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	26
LotjaGi3g1v0242900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0242900_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098 mobidb-lite	10
LotjaGi3g1v0258400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0258400_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd01647 cd09274	26
LotjaGi3g1v0264300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A0L9TXH6\|A0A0L9TXH6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0264300_LC	Domains G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF13650 PF17917 PF17921 PS50994 PTHR24559 PTHR24559:SF302 SSF50630 SSF53098 SSF56672 cd00303 cd01647 cd09274 mobidb-lite	30
LotjaGi3g1v0264800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0264800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0264900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0264900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0265100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0265200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0265500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0265600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0265600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0266900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0266900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0267900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0267900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0268400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0268400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0268800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0268800	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0270300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0270300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0271000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: ATMG00750.1 GAG/POL/ENV polyprotein (ChrM); Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151QYB1\|A0A151QYB1_CAJCA Gypsy retrotransposon integrase-like protein 1; Found in the gene: LotjaGi3g1v0271000_LC	Domains G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	12
LotjaGi3g1v0271300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT4G07350.1 hypothetical protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151TQ44\|A0A151TQ44_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0271300_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF290 SSF53098	9
LotjaGi3g1v0272300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0272300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0272400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0272400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0272900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0272900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0273100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0273100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0273300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0273300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0273800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0273800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0274100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G24450.1 phosphoglucan, water dikinase; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|Q6L3Q0\|Q6L3Q0_SOLDE Polyprotein, putative; Found in the gene: LotjaGi3g1v0274100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PTHR11439 PTHR11439:SF250 SSF53098	8
LotjaGi3g1v0274200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0274200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0274300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0274300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0275100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0275100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0277000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0277000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0278700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0278700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0279700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gypsy retrotransposon integrase-like protein 1; TAIR: ATMG00750.1 GAG/POL/ENV polyprotein (ChrM); Swiss-Prot: sp\|A4FUB7\|GIN1_BOVIN Gypsy retrotransposon integrase-like protein 1; TrEMBL-Plants: tr\|A0A151QNG0\|A0A151QNG0_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi3g1v0279700_LC	Domains G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR24559 PTHR24559:SF292 SSF53098	12
LotjaGi3g1v0306100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT2G14080.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151UHI6\|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi3g1v0306100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR001584 IPR012337 IPR036397 IPR041588 IPR043128 PF00665 PF17921 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	16
LotjaGi3g1v0306700_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT2G14080.2 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QLE6\|A0A151QLE6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi3g1v0306700_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	13
LotjaGi3g1v0307200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	43
LotjaGi3g1v0307200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	43
LotjaGi3g1v0307200_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	43
LotjaGi3g1v0373300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi3g1v0373300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi3g1v0423100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9V8\|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi3g1v0423100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9V8\|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi3g1v0517000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151U0F7\|A0A151U0F7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0517000_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	17
LotjaGi3g1v0519100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151THK7\|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0519100	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF247 SSF53098 SSF56672 cd09272 mobidb-lite	18
LotjaGi4g1v0044500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QY80\|A0A151QY80_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0044500_LC	Domains Coil G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	10
LotjaGi4g1v0107900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0107900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0122500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TAX5\|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0122500_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF250 SSF53098 SignalP-TM mobidb-lite	13
LotjaGi4g1v0156100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT4G21323.1 Subtilase family protein; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A0V0IPG6\|A0A0V0IPG6_SOLCH Putative DNA/RNA polymerases superfamily protein-like; Found in the gene: LotjaGi4g1v0156100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	9
LotjaGi4g1v0159700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P0CT41\|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr\|A0A151RZR6\|A0A151RZR6_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0159700_LC	Domains G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF50630 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi4g1v0163400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0163400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0171300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0171300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi4g1v0171800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0171800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0175000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0175000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0175600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0175600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0175900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0175900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0176000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0176000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0176900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0176900_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi4g1v0179000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151UH18\|A0A151UH18_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0179700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0179800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0179800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0180100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0180100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0180700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0180700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0180800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0180800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0180900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0180900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0181200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0181200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0181400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0181400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0181500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0181500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0182000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0182000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0182600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0182600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0182800_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT4G11270.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151TQ44\|A0A151TQ44_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0182800_LC	Domains Coil G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 NON_CYTOPLASMIC_DOMAIN PF00665 PS50994 PTHR24559 PTHR24559:SF290 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SignalP-noTM	16
LotjaGi4g1v0182900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0182900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0183000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0183000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0183100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G53520.3 UDP-glucuronic acid decarboxylase 1; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151RID1\|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0183100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	9
LotjaGi4g1v0183200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0183200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0183800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0183800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0184900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0184900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi4g1v0185500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151UHI6\|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi4g1v0185500_LC	Domains G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	24
LotjaGi4g1v0185500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151UHI6\|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi4g1v0185500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17917 PF17921 PS50878 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF56672 cd01647 cd09274	26
LotjaGi4g1v0190800_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TAX5\|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0190800_LC	Domains Coil G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF247 SSF53098 mobidb-lite	15
LotjaGi4g1v0190800_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RUP0\|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0190800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF247 SSF53098 mobidb-lite	14
LotjaGi4g1v0198200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2QD49\|A0A0B2QD49_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0198200_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF250 SSF53098	9
LotjaGi4g1v0205300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00750.1 GAG/POL/ENV polyprotein (ChrM); Swiss-Prot: sp\|Q4R6I1\|GIN1_MACFA Gypsy retrotransposon integrase-like protein 1; TrEMBL-Plants: tr\|A0A151U0L1\|A0A151U0L1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0205300_LC	Domains G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	12
LotjaGi4g1v0206700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT5G54690.1 galacturonosyltransferase 12; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151SYU9\|A0A151SYU9_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi4g1v0206700_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	9
LotjaGi4g1v0211100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi4g1v0211100_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF284 SSF53098	11
LotjaGi4g1v0213500_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W0\|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0213500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.50.40 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SM00298 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979	40
LotjaGi4g1v0214300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT5G37260.1 Homeodomain-like superfamily protein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151QNG0\|A0A151QNG0_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi4g1v0214300_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF292 SSF53098	9
LotjaGi4g1v0300100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151R4E2\|A0A151R4E2_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0300100_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 IPR001584 IPR002156 IPR012337 IPR036397 IPR041373 IPR041588 IPR043502 PF00665 PF13456 PF17917 PF17921 PS50879 PS50994 PTHR24559 PTHR24559:SF275 SSF53098 SSF56672 cd09279	20
LotjaGi4g1v0313200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2P7I4\|A0A0B2P7I4_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0313200	Domains G3DSA:3.30.420.10 IPR001584 IPR005162 IPR012337 IPR013103 IPR025724 IPR029472 IPR036397 IPR043502 PF00665 PF03732 PF07727 PF13976 PF14244 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	21
LotjaGi4g1v0347500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TNK0\|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0347500_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF250 SSF53098	11
LotjaGi4g1v0375700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi4g1v0375700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274 mobidb-lite	23
LotjaGi4g1v0461700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|A0A151REJ2\|A0A151REJ2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0461700_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR036397 IPR043502 PF00665 PF07727 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 mobidb-lite	14
LotjaGi5g1v0001700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151RZR6\|A0A151RZR6_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0001700_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	13
LotjaGi5g1v0045500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT2G35040.1 AICARFT/IMPCHase bienzyme family protein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151R1B3\|A0A151R1B3_CAJCA Gypsy retrotransposon integrase-like protein 1; Found in the gene: LotjaGi5g1v0045500_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	9
LotjaGi5g1v0096700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0096700_LC	Domains G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0100800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G05360.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|P04146\|COPIA_DROME Copia protein; TrEMBL-Plants: tr\|Q84VH6\|Q84VH6_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi5g1v0100800_LC	Domains Coil G3DSA:3.30.420.10 IPR000488 IPR001584 IPR001878 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50017 PS50158 PS50994 PTHR11439 PTHR11439:SF284 SSF53098 mobidb-lite	17
LotjaGi5g1v0121900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0121900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0124600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0124600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0124700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0124700	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi5g1v0125100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT4G07350.1 hypothetical protein; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151TQ44\|A0A151TQ44_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0125100_LC	Domains Coil G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF290 SSF53098	10
LotjaGi5g1v0125900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0125900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0126200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0126200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0126300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0126300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0126500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0126500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0126700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0126700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0127500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0127500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0127600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0127600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0127900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0127900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0128900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129100_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129400	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0129900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129900	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0130000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0130000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0130300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151TP24\|A0A151TP24_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0130300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00665 PF17919 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd09274	18
LotjaGi5g1v0131200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0131200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0131800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|Q2HU05\|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi5g1v0131800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR036397 IPR043502 PF00665 PF07727 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 mobidb-lite	14
LotjaGi5g1v0132300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0132300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0133200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0133200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0134500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0134500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0142000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0142000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0143700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0143700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0146200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TAX5\|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0146200_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	18
LotjaGi5g1v0149900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G53520.3 UDP-glucuronic acid decarboxylase 1; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151RID1\|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0149900_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	9
LotjaGi5g1v0150900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|B5U9W1\|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0150900_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.50.40 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR000953 IPR001584 IPR012337 IPR016197 IPR021109 IPR023780 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00385 PF00665 PF08284 PF17919 PF17921 PS50013 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SM00298 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	41
LotjaGi5g1v0166000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151RR28\|A0A151RR28_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0166000_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	13
LotjaGi5g1v0166000_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151RZR6\|A0A151RZR6_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0166000_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17919 PF17921 PS50878 PS50994 PTHR46148 PTHR46148:SF14 SSF53098 SSF56672 cd01647 cd09274	27
LotjaGi5g1v0171900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, Ty3-gypsy subclass, putative; TAIR: AT5G45440.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A0V0IPG6\|A0A0V0IPG6_SOLCH Putative DNA/RNA polymerases superfamily protein-like; Found in the gene: LotjaGi5g1v0171900_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	9
LotjaGi5g1v0200800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G17250.1 receptor like protein 3; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|A0A151R7E6\|A0A151R7E6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi5g1v0200800_LC	Domains G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000953 IPR001584 IPR012337 IPR016197 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00665 PF17917 PF17921 PS50013 PS50994 PTHR24559 PTHR24559:SF294 SSF53098 SSF54160 SSF56672 cd09274 cd18979	25
LotjaGi5g1v0201700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT5G43450.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|Q949K9\|Q949K9_CICAR Putative polyprotein; Found in the gene: LotjaGi5g1v0201700_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR46148 PTHR46148:SF14 SSF53098	9
LotjaGi5g1v0210800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT5G37260.1 Homeodomain-like superfamily protein; Swiss-Prot: sp\|Q9TTC1\|POL_KORV Pro-Pol polyprotein; TrEMBL-Plants: tr\|A0A151RGC6\|A0A151RGC6_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0210800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	9
LotjaGi5g1v0265600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151UBW1\|A0A151UBW1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0265600_LC	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR025724 IPR036397 IPR036875 PF00098 PF00665 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF57756 mobidb-lite	20
LotjaGi5g1v0277700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0277700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0283400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0283400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi5g1v0343500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P0CT41\|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr\|A2Q2C7\|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi5g1v0343500_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF03732 PF08284 PF17919 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF294 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18979 mobidb-lite	37
LotjaGi6g1v0037400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|B8YLY7\|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0037400	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00098 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF265 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	25
LotjaGi6g1v0063200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp\|Q5RBK0\|GIN1_PONAB Gypsy retrotransposon integrase-like protein 1; TrEMBL-Plants: tr\|A0A151QYL3\|A0A151QYL3_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi6g1v0063200_LC	Domains G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR002156 IPR012337 IPR036397 IPR041588 PF00665 PF13456 PF17921 PS50879 PS50994 PTHR24559 PTHR24559:SF275 SSF53098 cd09279	16
LotjaGi6g1v0065300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0065300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0087400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QKV3\|A0A151QKV3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0087400_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR11439 PTHR11439:SF265 SSF53098	9
LotjaGi6g1v0093200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: AT3G17800.1 alanine-tRNA ligase, putative (DUF760); Swiss-Prot: sp\|P08361\|POL_MLVCB Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QTN7\|A0A151QTN7_CAJCA Pol polyprotein; Found in the gene: LotjaGi6g1v0093200_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 PF00665 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	9
LotjaGi6g1v0098900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00750.1 GAG/POL/ENV polyprotein (ChrM); Swiss-Prot: sp\|P27401\|POL_SFV3L Pro-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNG0\|A0A151QNG0_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi6g1v0098900_LC	Domains G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	12
LotjaGi6g1v0100600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RUP0\|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0100600_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	17
LotjaGi6g1v0103300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0103300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0107800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0107800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0115500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0115500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0115900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0115900_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0116300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0116300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0116600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0116600_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0122300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0122300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0122400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0122400_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0122500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0122500_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0122800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0122800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0123600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0123600_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi6g1v0125300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0125300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0125700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0125700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR043128 IPR043502 PF00078 PF00665 PF17917 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0125800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0125800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0127300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0127300_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0127800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2P7I4\|A0A0B2P7I4_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0127800_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR025724 IPR036397 PF00665 PF13976 PS50994 PTHR11439 PTHR11439:SF250 SSF53098	11
LotjaGi6g1v0129200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0129200_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0129700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0129700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0129800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0129800_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0129900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0129900_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	21
LotjaGi6g1v0130000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0130000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0130700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0130700_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0133800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RAD3\|A0A151RAD3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0133800	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR029472 IPR036397 IPR043502 PF00665 PF07727 PF13976 PF14223 PF14244 PS50994 PTHR11439 PTHR11439:SF273 SSF53098 SSF56672 cd09272 mobidb-lite	20
LotjaGi6g1v0146600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00750.1 GAG/POL/ENV polyprotein (ChrM); Swiss-Prot: sp\|P23074\|POL_SFV1 Pro-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QYB1\|A0A151QYB1_CAJCA Gypsy retrotransposon integrase-like protein 1; Found in the gene: LotjaGi6g1v0146600_LC	Domains G3DSA:1.10.340.70 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041588 PF00665 PF17921 PS50994 PTHR24559 PTHR24559:SF275 SSF53098	12
LotjaGi6g1v0147000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A178U8C0\|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0147000_LC	Domains Coil G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041577 IPR043128 IPR043502 PF00078 PF00665 PF17919 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd01647 cd09274	22
LotjaGi6g1v0187000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A5AGK3\|A5AGK3_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0187000	Domains G3DSA:3.30.420.10 G3DSA:4.10.60.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR029472 IPR036397 IPR036875 IPR043502 PF00098 PF00665 PF07727 PF13976 PF14223 PF14244 PS50158 PS50994 PTHR11439 PTHR11439:SF273 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	27
LotjaGi6g1v0199700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TMN9\|A0A151TMN9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0199700	Domains G3DSA:3.30.420.10 IPR001584 IPR001878 IPR012337 IPR013103 IPR025724 IPR036397 IPR036875 IPR043502 PF00665 PF07727 PF13976 PF14223 PS50158 PS50994 PTHR11439 PTHR11439:SF273 SM00343 SSF53098 SSF56672 SSF57756 cd09272 mobidb-lite	23
LotjaGi6g1v0199900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A0B2QIT1\|A0A0B2QIT1_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0199900	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00665 PF07727 PF13976 PF14223 PS50994 PTHR11439 PTHR11439:SF247 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53098 SSF56672 cd09272 mobidb-lite	23
LotjaGi6g1v0214100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214100_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214100_LC.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214100_LC.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0214100_LC.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR001969 IPR005162 IPR012337 IPR021109 IPR036397 IPR036875 IPR041577 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17919 PF17921 PS00141 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF290 SM00343 SSF50630 SSF53098 SSF56672 SSF57756 cd00303 cd01647 cd06503 cd09274 mobidb-lite	44
LotjaGi6g1v0218100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0272400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0272400_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR025724 IPR036397 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00665 PF07727 PF13976 PS50994 PTHR11439 PTHR11439:SF247 SSF53098 SSF56672 SignalP-TM TMhelix TRANSMEMBRANE cd09272 mobidb-lite	22
LotjaGi6g1v0319500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QUV8\|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0319500_LC	Domains G3DSA:3.30.420.10 IPR001584 IPR012337 IPR013103 IPR036397 IPR043502 PF00665 PF07727 PS50994 PTHR11439 PTHR11439:SF264 SSF53098 SSF56672	13
LotjaGi6g1v0364400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT4G36690.3 U2 snRNP auxilliary factor, large subunit, splicing factor; Swiss-Prot: sp\|Q9UR07\|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr\|B5U9V8\|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0364400_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.20.370 G3DSA:3.30.420.10 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043502 PF00665 PF17917 PF17921 PS50994 PTHR24559 PTHR24559:SF290 SSF53098 SSF56672 cd09274	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd09274	CDD	1	0.34