Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR11601:SF34

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0030170 View details of GO:0030170 AmiGO InterPro QuickGO	Molecular function	Pyridoxal phosphate binding	Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.	Subterm of GO:0043168 GO:0050662 GO:0070279
GO:0031071 View details of GO:0031071 AmiGO InterPro QuickGO	Molecular function	Cysteine desulfurase activity	Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine.	Subterm of GO:0016783
GO:0044571 View details of GO:0044571 AmiGO InterPro QuickGO	Biological process	[2Fe-2S] cluster assembly	The incorporation of two iron atoms and two sulfur atoms into an iron-sulfur cluster.	Subterm of GO:0016226

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1984080.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cysteine desulfurase 1, mitochondrial-like isoform 1 [Glycine max] gi\|356497029\|ref\|XP_003517367.1\|	Domains G3DSA:3.40.640.10 G3DSA:3.90.1150.10 IPR000192 IPR010240 IPR015421 IPR015422 IPR015424 IPR016454 MF_00331 PF00266 PIRSF005572 PTHR11601 PTHR11601:SF34 SSF53383 TIGR02006	15
LotjaGi2g1v0412800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cysteine desulfurase IscS; TAIR: AT5G65720.1 nitrogen fixation S (NIFS)-like 1; Swiss-Prot: sp\|O49543\|MNIF1_ARATH Cysteine desulfurase, mitochondrial; TrEMBL-Plants: tr\|A0A1J7FXI5\|A0A1J7FXI5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0412800	Domains G3DSA:3.40.640.10 G3DSA:3.90.1150.10 IPR000192 IPR010240 IPR015421 IPR015422 IPR015424 IPR016454 MF_00331 PF00266 PIRSF005572 PTHR11601 PTHR11601:SF34 SSF53383 TIGR02006	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TIGR02006	TIGRFAM	1	50.00