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PTHR12299

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
Lj0g3v0106979.1
– PREDICTED: intracellular hyaluronan-binding protein 4-like [Cicer arietinum] gi|502106352|ref|XP_004492923.1|
Domains
4
Lj0g3v0107019.1
– PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cicer arietinum] gi|502173509|ref|XP_004515346.1|
Domains
5
Lj1g3v2923020.1
– PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cicer arietinum] gi|502173509|ref|XP_004515346.1|
Domains
9
Lj2g3v2748810.1
– PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cicer arietinum] gi|502173509|ref|XP_004515346.1|
Domains
6
Lj3g3v2517540.1
– PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Cicer arietinum] gi|502173509|ref|XP_004515346.1|
Domains
6
LotjaGi1g1v0495200.1
– RNA binding protein, putative; TAIR: AT4G17520.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|O23593|RGGB_ARATH RGG repeats nuclear RNA binding protein B; TrEMBL-Plants: tr|I3STC5|I3STC5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0495200
Domains
10
LotjaGi2g1v0330700_LC.1
– RNA binding protein; TAIR: AT5G47210.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|Q9LVT8|RGGC_ARATH RGG repeats nuclear RNA binding protein C; TrEMBL-Plants: tr|A0A1J7HKP6|A0A1J7HKP6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0330700_LC
Domains
6
LotjaGi2g1v0330700_LC.2
– RNA binding protein, putative; TAIR: AT4G16830.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|O23523|RGGA_ARATH RGG repeats nuclear RNA binding protein A; TrEMBL-Plants: tr|Q2PEQ5|Q2PEQ5_TRIPR Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0330700_LC
Domains
8
LotjaGi2g1v0330700_LC.3
– RNA binding protein; TAIR: AT5G47210.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|Q9LVT8|RGGC_ARATH RGG repeats nuclear RNA binding protein C; TrEMBL-Plants: tr|A0A1J7HKP6|A0A1J7HKP6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0330700_LC
Domains
6
LotjaGi3g1v0067700.1
– RNA binding protein, putative; TAIR: AT4G17520.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|O23593|RGGB_ARATH RGG repeats nuclear RNA binding protein B; TrEMBL-Plants: tr|A0A1J7GE57|A0A1J7GE57_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0067700
Domains
10
LotjaGi3g1v0403600_LC.1
– RNA binding protein, putative; TAIR: AT4G17520.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|O23593|RGGB_ARATH RGG repeats nuclear RNA binding protein B; TrEMBL-Plants: tr|A0A1J7H3A4|A0A1J7H3A4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0403600_LC
Domains
7
LotjaGi3g1v0403600_LC.2
– RNA binding protein, putative; TAIR: AT4G17520.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|O23593|RGGB_ARATH RGG repeats nuclear RNA binding protein B; TrEMBL-Plants: tr|Q2PEQ5|Q2PEQ5_TRIPR Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0403600_LC
Domains
7
LotjaGi3g1v0403600_LC.3
– RNA binding protein, putative; TAIR: AT4G17520.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|O23593|RGGB_ARATH RGG repeats nuclear RNA binding protein B; TrEMBL-Plants: tr|A0A1J7H3A4|A0A1J7H3A4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0403600_LC
Domains
7
LotjaGi3g1v0403600_LC.6
– RNA binding protein, putative; TAIR: AT4G17520.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|O23593|RGGB_ARATH RGG repeats nuclear RNA binding protein B; TrEMBL-Plants: tr|A0A1J7H3A4|A0A1J7H3A4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0403600_LC
Domains
11
LotjaGi5g1v0009500_LC.1
– RNA binding protein, putative; TAIR: AT4G16830.1 Hyaluronan / mRNA binding family; Swiss-Prot: sp|O23523|RGGA_ARATH RGG repeats nuclear RNA binding protein A; TrEMBL-Plants: tr|Q2PEQ5|Q2PEQ5_TRIPR Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0009500_LC
Domains
7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 6.67