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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Protein SMG9 [Medicago truncatula] gi|357481127|ref|XP_003610849.1| | 3 | ||
| – | PREDICTED: protein SMG9-like [Glycine max] gi|356540359|ref|XP_003538657.1| | 5 | ||
| – | PREDICTED: protein SMG9-like [Glycine max] gi|356495737|ref|XP_003516730.1| | 3 | ||
| – | 3 | |||
| – | PREDICTED: protein SMG9-like [Glycine max] gi|356495737|ref|XP_003516730.1| | 3 | ||
| – | 3 | |||
| – | PREDICTED: protein SMG9-like [Glycine max] gi|356540359|ref|XP_003538657.1| | 4 | ||
| – | Protein SMG9 [Medicago truncatula] gi|357481127|ref|XP_003610849.1| | 3 | ||
| – | Protein SMG9 [Medicago truncatula] gi|357481127|ref|XP_003610849.1| | 5 | ||
| – | TIR-NBS-LRR class disease resistance protein; TAIR: AT5G18370.1 disease resistance protein (TIR-NBS-LRR class) family protein; Swiss-Prot: sp|Q5PQS6|SMG9_RAT Protein SMG9; TrEMBL-Plants: tr|V7CID3|V7CID3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0449700 | 5 | ||
| – | TIR-NBS-LRR class disease resistance protein; TAIR: AT5G18370.1 disease resistance protein (TIR-NBS-LRR class) family protein; Swiss-Prot: sp|Q5PQS6|SMG9_RAT Protein SMG9; TrEMBL-Plants: tr|V7CID3|V7CID3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0175200 | 5 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF52540 | SUPERFAMILY | 1 | 9.09 |