Domain Predictions — View

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PTHR42908:SF23

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0370000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|G7IH34\|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF23 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0370000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|G7IH34\|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF23 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 cd01681 cd04096 cd16261 cd16268	37
LotjaGi3g1v0370000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|G7IH34\|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF23 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40
LotjaGi3g1v0370000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp\|Q9ASR1\|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr\|G7IH34\|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 G3DSA:3.90.1430.10 IPR000640 IPR000795 IPR004161 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR42908 PTHR42908:SF23 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 cd01681 cd01885 cd04096 cd16261 cd16268	40

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd16268	CDD	1	25.00