Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0370000 |
| Transcript ID | LotjaGi3g1v0370000.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp|Q9ASR1|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr|G7IH34|G7IH34_MEDTR Translation elongation factor EF-2 subunit; Found in the gene: LotjaGi3g1v0370000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75657825..75660842) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCTTGCGTTAATGGATGCTAAGAGAAACTGGTTTATCTTGTGCAGGTGAAGTTTACGGCCGAAGAACTTCGGCGGAA TATGGACCTCAAACACAATATCAGGAATATGTCTGTTATTGCTCATGTTGATCATGGTATGCTATTACTATTCTTGGCTC AGTTTATGTTATCTGCACCTTTATTTGATTTAGAACATTCTTCAAAGTTTTTGTGAATTTGACTATTTTGCAACTGATAG TCAACCCTTGACAATGTAGTTCAGTAGTTGTTTAGGTTTAGCCTTTGCATCTTTGTGGTAGAAATTAAAATTTTTCAAGA TTTCTTTCAATTTCTGATCTTTGATCTCTTATACTATATATCATAATAATGAGAAATTGCTGTATGTTATGCAATACCCA CCCAAGAAAAGCATGGTAGCTCAATTATAGTACATGACAGGGCTAATTGAAAATTTACAAAGACAATCTGTACTCGTGCT TTTTCGTTTTCGTAGTTAATAGAATTTTCCTATCATTATTGAGATTTTTTTGTAGATATTACTACAGTATTTTAATTAGT TTCTGGAATTGTTGCAGGGAAGTCAACTCTCACTGATTCTCTGGTGGCTGCTGCGGGTATTATTGCACAAGAGAATGCAG GAGATGTTAGGATGACAGATACCCGTGCAGATGAAGCTGAGCGCGGTATAACAATCAAGTCCACTGGTATCTCTCTTTAC TACGAGATGAGTGATGAGGATTTGAAGGACTACAAGGGAGAACGTGAAGGGAATCAGTATCTGATTAATCTCATTGACTC ACCCGGACATGTTGATTTCTCATCTGAGGTCACTGCTGCACTTCGTATCACTGATGGAGCGCTTGTGGTGGTGGATTGTG TTGAGGGTGTTTGTGTCCAAACAGAGACTGTTCTGAGACAGGCCCTTGGAGAAAGGATTAGGCCTGTGTTGACTGTGAAC AAGATGGATAGGTGCTTCCTTGAGTTGCAACTTGATGCAGAGGAGGCATACCTTACCTTTCAGAGGGTTATTGAGAGTGC AAATGTCATCATGGCTACCTATGAAGATGCTCTACTTGGTGATGTTCAGGTGTATCCTGAAAAGGGAACTGTTGCTTTCT CTGCTGGTTTACATGGATGGGCTTTTACCCTGACCAATTTTGCAAAGATGTATGCTTCAAAGTTTGGAGTGGATGAGGCG AAGATGATGACCAGGCTTTGGGGTGAAAATTTCTTTGACCCTGCTACCAAAAAGTGGACCAACAAGCACACTGGAACTTC TACTTGTAAACGTGGGTTTGTCCAGTTCTGCTATGAACCAATCAAGAAGATTATTGAACTTTGTATGAATGACCAGAAGG ATAAGTTGTGGCCCATGTTGCCAAAGCTTGGGGTGAACTTGAAGTCAGAGGAGAAGGAGTTGACCGGAAAGGCTTTGATG AAGCGTGTCATGCAGAGCTGGCTCCCAGCAAGCAGTGCCCTTCTTGAGATGATGATATTTCATCTACCTTCCCCTGCCAA GGCTCAAAGATATCGCGTCGAGAATTTGTACGAGGGTCCCCTTGATGATCAATATGCTACTGCTATCAGAAACTGTGACC CTGAAGGACCTCTGATGCTTTATGTCTCAAAGATGATTCCAGCACCTGATAAGGGAAGGTTTTTTGCTTTTGGCCGTGTC TTCTCTGGTAAGGTCTCAACTGGTATGAAGGTCAGAATCATGGGACCAAATTATGTCCCTGGGGAGAAGAAGGACCTATA TGTCAAGAGTGTTCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACTGTTGAGCATGTCCCTTGTGGAAACACAG TTGCCATGGTGGGTTTGGATCAGTTTATTACCAAGAATGCCACTTTAACGAACGAGAAAGAAGTCGATGCACATCCTATT CGGGCCATGAAGTTTTCTGTGTCACCTGTGGTGAGTGTGGCTGTTACATGCAAGATTGCATCAGAGCTTCCTAAGCTTGT TGAAGGCCTGAAACGGTTAGCAAAGTCAGACCCCATGGTGGTGTGTACAATTTCAGAGACTGGAGAACACATCATAGCGG CTGCTGGTGAGCTGCATCTTGAAATCTGCTTGAAGGACTTGCAGGATGATTTCATGAATGGAGCAGAGATTACAAAATCT GAACCTATTGTCTCCTTCCGCGAAACCGTGTTTGAGAAATCCTGTCGTACCGTGATGAGCAAGTCACCTAACAAACACAA CCGTCTGTACATTGAAGCAAGGCCAATGGAGGATGGTCTTGCAGAGGCCATTGATGATGGAAAGATAGGACCAAGGGATG ACCCCAAAACTCGTTCTAAGATACTGTCTGAAGAGTTTGGTTGGGACAAGGATCTTGCCAAGAAAATATGGTGCTTTGGT CCTGAGACAACTGGACCCAACATGGTGGTAGATACATGCAAGGGTGTTCAGTATCTGAGTGAAATCAAGGACTCAGTGGT TGCTGGGTTTCAGATAGCATCAAAAGAAGGTCCATTGGCTGATGAGAACATGAGAGGAGTTTGCTTTGAGATTTGTGATG TTGTTCTGCATGCTGATGCCATTCACAGAGGAGGAGGGCAGATCATTCCAACTGCTAGAAGGGTGTTCTATGCTGCGACG CTGACGGCGAAGCCGAGACTTTTGGAGCCTGTGTATCTGGTAGAAATACAGTCACCAGAACAGGCTCTTGGTGGAATATA TAGTGTTCTTAACCAGAGAAGAGGGCACGTGTTTGAGGAAATCCAGAGGCCTGGAACCCCACTTTACAATGTTAAGGCAT ACTTGCCTGTTATTGAGTCATTCAACTTCAATGAATTACTGAGGCAACAAACTGCAGGACAAGCTTTCCCACAGTTGGTG TTTGATCACTGGGATATGGTGCCATCTGATCCACTGGAACCTGGAACTCCTGCTGCTGTGCGTGTTGCTGAGATCAGGCG AAAGAAAGGCCTTAAAGAACAAATGACGCCTCTCTCTGAGTTTGAGGATAGGCTTTGA
CDS sequence (LotjaGi3g1v0370000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCTCAAACACAATATCAGGAATATGTCTGTTATTGCTCATGTTGATCATGGGAAGTCAACTCTCACTGATTCTCT GGTGGCTGCTGCGGGTATTATTGCACAAGAGAATGCAGGAGATGTTAGGATGACAGATACCCGTGCAGATGAAGCTGAGC GCGGTATAACAATCAAGTCCACTGGTATCTCTCTTTACTACGAGATGAGTGATGAGGATTTGAAGGACTACAAGGGAGAA CGTGAAGGGAATCAGTATCTGATTAATCTCATTGACTCACCCGGACATGTTGATTTCTCATCTGAGGTCACTGCTGCACT TCGTATCACTGATGGAGCGCTTGTGGTGGTGGATTGTGTTGAGGGTGTTTGTGTCCAAACAGAGACTGTTCTGAGACAGG CCCTTGGAGAAAGGATTAGGCCTGTGTTGACTGTGAACAAGATGGATAGGTGCTTCCTTGAGTTGCAACTTGATGCAGAG GAGGCATACCTTACCTTTCAGAGGGTTATTGAGAGTGCAAATGTCATCATGGCTACCTATGAAGATGCTCTACTTGGTGA TGTTCAGGTGTATCCTGAAAAGGGAACTGTTGCTTTCTCTGCTGGTTTACATGGATGGGCTTTTACCCTGACCAATTTTG CAAAGATGTATGCTTCAAAGTTTGGAGTGGATGAGGCGAAGATGATGACCAGGCTTTGGGGTGAAAATTTCTTTGACCCT GCTACCAAAAAGTGGACCAACAAGCACACTGGAACTTCTACTTGTAAACGTGGGTTTGTCCAGTTCTGCTATGAACCAAT CAAGAAGATTATTGAACTTTGTATGAATGACCAGAAGGATAAGTTGTGGCCCATGTTGCCAAAGCTTGGGGTGAACTTGA AGTCAGAGGAGAAGGAGTTGACCGGAAAGGCTTTGATGAAGCGTGTCATGCAGAGCTGGCTCCCAGCAAGCAGTGCCCTT CTTGAGATGATGATATTTCATCTACCTTCCCCTGCCAAGGCTCAAAGATATCGCGTCGAGAATTTGTACGAGGGTCCCCT TGATGATCAATATGCTACTGCTATCAGAAACTGTGACCCTGAAGGACCTCTGATGCTTTATGTCTCAAAGATGATTCCAG CACCTGATAAGGGAAGGTTTTTTGCTTTTGGCCGTGTCTTCTCTGGTAAGGTCTCAACTGGTATGAAGGTCAGAATCATG GGACCAAATTATGTCCCTGGGGAGAAGAAGGACCTATATGTCAAGAGTGTTCAGAGAACTGTCATTTGGATGGGAAAGAA GCAAGAAACTGTTGAGCATGTCCCTTGTGGAAACACAGTTGCCATGGTGGGTTTGGATCAGTTTATTACCAAGAATGCCA CTTTAACGAACGAGAAAGAAGTCGATGCACATCCTATTCGGGCCATGAAGTTTTCTGTGTCACCTGTGGTGAGTGTGGCT GTTACATGCAAGATTGCATCAGAGCTTCCTAAGCTTGTTGAAGGCCTGAAACGGTTAGCAAAGTCAGACCCCATGGTGGT GTGTACAATTTCAGAGACTGGAGAACACATCATAGCGGCTGCTGGTGAGCTGCATCTTGAAATCTGCTTGAAGGACTTGC AGGATGATTTCATGAATGGAGCAGAGATTACAAAATCTGAACCTATTGTCTCCTTCCGCGAAACCGTGTTTGAGAAATCC TGTCGTACCGTGATGAGCAAGTCACCTAACAAACACAACCGTCTGTACATTGAAGCAAGGCCAATGGAGGATGGTCTTGC AGAGGCCATTGATGATGGAAAGATAGGACCAAGGGATGACCCCAAAACTCGTTCTAAGATACTGTCTGAAGAGTTTGGTT GGGACAAGGATCTTGCCAAGAAAATATGGTGCTTTGGTCCTGAGACAACTGGACCCAACATGGTGGTAGATACATGCAAG GGTGTTCAGTATCTGAGTGAAATCAAGGACTCAGTGGTTGCTGGGTTTCAGATAGCATCAAAAGAAGGTCCATTGGCTGA TGAGAACATGAGAGGAGTTTGCTTTGAGATTTGTGATGTTGTTCTGCATGCTGATGCCATTCACAGAGGAGGAGGGCAGA TCATTCCAACTGCTAGAAGGGTGTTCTATGCTGCGACGCTGACGGCGAAGCCGAGACTTTTGGAGCCTGTGTATCTGGTA GAAATACAGTCACCAGAACAGGCTCTTGGTGGAATATATAGTGTTCTTAACCAGAGAAGAGGGCACGTGTTTGAGGAAAT CCAGAGGCCTGGAACCCCACTTTACAATGTTAAGGCATACTTGCCTGTTATTGAGTCATTCAACTTCAATGAATTACTGA GGCAACAAACTGCAGGACAAGCTTTCCCACAGTTGGTGTTTGATCACTGGGATATGGTGCCATCTGATCCACTGGAACCT GGAACTCCTGCTGCTGTGCGTGTTGCTGAGATCAGGCGAAAGAAAGGCCTTAAAGAACAAATGACGCCTCTCTCTGAGTT TGAGGATAGGCTTTGA
Protein sequence (LotjaGi3g1v0370000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQENAGDVRMTDTRADEAERGITIKSTGISLYYEMSDEDLKDYKGE REGNQYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQLDAE EAYLTFQRVIESANVIMATYEDALLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMTRLWGENFFDP ATKKWTNKHTGTSTCKRGFVQFCYEPIKKIIELCMNDQKDKLWPMLPKLGVNLKSEEKELTGKALMKRVMQSWLPASSAL LEMMIFHLPSPAKAQRYRVENLYEGPLDDQYATAIRNCDPEGPLMLYVSKMIPAPDKGRFFAFGRVFSGKVSTGMKVRIM GPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEHVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVSVA VTCKIASELPKLVEGLKRLAKSDPMVVCTISETGEHIIAAAGELHLEICLKDLQDDFMNGAEITKSEPIVSFRETVFEKS CRTVMSKSPNKHNRLYIEARPMEDGLAEAIDDGKIGPRDDPKTRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDTCK GVQYLSEIKDSVVAGFQIASKEGPLADENMRGVCFEICDVVLHADAIHRGGGQIIPTARRVFYAATLTAKPRLLEPVYLV EIQSPEQALGGIYSVLNQRRGHVFEEIQRPGTPLYNVKAYLPVIESFNFNELLRQQTAGQAFPQLVFDHWDMVPSDPLEP GTPAAVRVAEIRRKKGLKEQMTPLSEFEDRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 330 | 330 | 1.6E-188 | – | |
| PANTHER | 1 | 831 | 831 | 0.0 | – | |
| PANTHER | 1 | 831 | 831 | 0.0 | – | |
| SUPERFAMILY | 2 | 329 | 328 | 5.49E-105 | ||
| Pfam | 5 | 330 | 326 | 7.0E-65 | ||
| ProSiteProfiles | 5 | 332 | 328 | 53.643 | ||
| TIGRFAM | 8 | 157 | 150 | 1.0E-16 | ||
| CDD | 8 | 218 | 211 | 1.77559E-122 | – | |
| PRINTS | 9 | 22 | 14 | 3.7E-14 | ||
| ProSitePatterns | 46 | 61 | 16 | - | ||
| PRINTS | 53 | 61 | 9 | 3.7E-14 | ||
| Gene3D | 55 | 457 | 403 | 1.6E-188 | – | |
| PRINTS | 89 | 99 | 11 | 3.7E-14 | ||
| PRINTS | 105 | 116 | 12 | 3.7E-14 | ||
| PRINTS | 141 | 150 | 10 | 3.7E-14 | ||
| Gene3D | 210 | 314 | 105 | 1.6E-188 | – | |
| SUPERFAMILY | 330 | 464 | 135 | 5.96E-42 | ||
| CDD | 363 | 458 | 96 | 5.43911E-43 | – | |
| Pfam | 382 | 455 | 74 | 4.9E-12 | ||
| SUPERFAMILY | 472 | 548 | 77 | 4.68E-17 | ||
| Gene3D | 473 | 551 | 79 | 5.4E-31 | – | |
| Pfam | 474 | 538 | 65 | 3.5E-11 | ||
| CDD | 483 | 547 | 65 | 2.11607E-29 | – | |
| CDD | 547 | 719 | 173 | 1.71513E-99 | – | |
| SUPERFAMILY | 550 | 714 | 165 | 3.29E-66 | ||
| Gene3D | 553 | 817 | 265 | 4.3E-121 | – | |
| Gene3D | 559 | 821 | 263 | 4.3E-121 | ||
| SMART | 593 | 710 | 118 | 1.8E-26 | ||
| Pfam | 598 | 710 | 113 | 3.5E-31 | ||
| SMART | 712 | 801 | 90 | 6.8E-18 | ||
| Pfam | 712 | 798 | 87 | 1.4E-19 | ||
| CDD | 715 | 794 | 80 | 3.79073E-48 | – | |
| SUPERFAMILY | 715 | 824 | 110 | 3.17E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0370000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…